Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_P12
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 38 0.007
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 38 0.007
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 38 0.007
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 32 0.63
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 32 0.63
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 32 0.63
AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z p... 31 1.4
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 30 1.9
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical p... 29 5.8
Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical p... 29 5.8
Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical p... 29 5.8
Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 5.8
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 5.8
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical pr... 28 7.7
AJ011936-1|CAB41353.1| 66|Caenorhabditis elegans cyclic AMP-de... 28 7.7
AF100307-8|AAC68937.2| 250|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 672 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 730
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 731 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 790
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 791 PSSSSSSSTNPPH-QHQLTHNA 811
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 825 PSSSSSSSTNPPH-QHQLTHNA 845
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 921 PSSSSSSSTNPPH-QHQLTHNA 941
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 672 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 730
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 731 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 790
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 791 PSSSSSSSTNPPH-QHQLTHNA 811
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 825 PSSSSSSSTNPPH-QHQLTHNA 845
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 921 PSSSSSSSTNPPH-QHQLTHNA 941
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 825 PSSSSSSSTNPPH-QHQLTHNA 845
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 5/142 (3%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSV 264
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 265 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 429
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 430 YSSEHSMSQDQGKIQHQVDEEA 495
SS S S + QHQ+ A
Sbjct: 921 PSSSSSSSTNPPH-QHQLTHNA 941
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 172 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 270
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 172 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 270
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 172 EKPREELPTRALRPRSTLTRKTTNALSSQSVGS 270
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z
protein 1 protein.
Length = 306
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 505 HWKGPLHQLGVEFFLGLDSWSAHWNMH 425
H G H+ GVE+++G +SW W H
Sbjct: 248 HGWGVDHESGVEYWIGRNSWGEPWGEH 274
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 30.3 bits (65), Expect = 1.9
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +1
Query: 214 RSTLTRKTTNALSSQSVGSGGSAKRKTALN-KNQIPKTNVHSGGDGCLLLERTTLSGIPL 390
R + R +TNA S+ VG G + TA N + IP T V G G + R + PL
Sbjct: 121 RVLMNRSSTNAGLSRMVGGGYDQQLPTAPNGRLMIPSTAVRVPGSG-MASPRLQTTPQPL 179
Query: 391 IQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEAL 498
+ + AY + Q + + DEE L
Sbjct: 180 TKSQKAKDEMKMAYQVGREEALQQRRNDLEDDEENL 215
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESD-GLPPASSSSIAAQEKPREELP 195
+R + E + EE D G+ PA + QEKPR++ P
Sbjct: 224 EREDTVDESKGEEEEDQGVRPAQKRQVKQQEKPRKQKP 261
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 85 DRMSQIAEEQKLEESD-GLPPASSSSIAAQEKPREELP 195
+R + E + EE D G+ PA + QEKPR++ P
Sbjct: 224 EREDTVDESKGEEEEDQGVRPAQKRQVKQQEKPRKQKP 261
>Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 241 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 420
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 421 PDAYSS 438
A ++
Sbjct: 63 NPAQNT 68
>Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 241 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 420
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 421 PDAYSS 438
A ++
Sbjct: 63 NPAQNT 68
>Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 241 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 420
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 421 PDAYSS 438
A ++
Sbjct: 63 NPAQNT 68
>Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 241 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 420
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 421 PDAYSS 438
A ++
Sbjct: 63 NPAQNT 68
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +1
Query: 118 LEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKT 294
L + +PP +S+S +KP + P ST T TT + S + S T
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +1
Query: 118 LEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKT 294
L + +PP +S+S +KP + P ST T TT + S + S T
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +1
Query: 106 EEQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAK 285
++++ E S +P ASS I++QE+P E T + + S ++ ++ +S+ + + K
Sbjct: 221 KKKEAEASTSVPQASSPDISSQEQP--ESSTSSSKKPSKKEKEPSDPMSTFVLDNWKKKK 278
Query: 286 RKTALNKN 309
R LN +
Sbjct: 279 RDYKLNSS 286
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/97 (19%), Positives = 37/97 (38%)
Frame = +1
Query: 217 STLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQ 396
S + T+ S+ S +K A + +P T + + ++ + ++ L+
Sbjct: 317 SQIQNLTSIGSSASSSAQPSQPAKKAAPKRKTVPNTAKNLAQNQQIMPPQAQITPTKLVM 376
Query: 397 DDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEALSNE 507
D P + S H S D +Q+DE S +
Sbjct: 377 DPPTTTMVPSSSQSNHMYSNDGFTTYNQMDEPGTSQQ 413
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/97 (19%), Positives = 37/97 (38%)
Frame = +1
Query: 217 STLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQ 396
S + T+ S+ S +K A + +P T + + ++ + ++ L+
Sbjct: 303 SQIQNLTSIGSSASSSAQPSQPAKKAAPKRKTVPNTAKNLAQNQQIMPPQAQITPTKLVM 362
Query: 397 DDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEALSNE 507
D P + S H S D +Q+DE S +
Sbjct: 363 DPPTTTMVPSSSQSNHMYSNDGFTTYNQMDEPGTSQQ 399
>Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical
protein C08B11.2 protein.
Length = 507
Score = 28.3 bits (60), Expect = 7.7
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)
Frame = +1
Query: 298 LNKNQIPKTNVHSGGDGCLLLERTTLS------GIPLIQDDNDQGWRPDAY--------- 432
L N +PK N + +E+ TL+ G P +Q N G R D
Sbjct: 364 LRPNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQMQNIVGIRLDEIEQIEENERL 423
Query: 433 --SSEHSMSQDQGKIQHQVDEEALSNEDVEP 519
SS+ S+ + GK+ +++EE ED +P
Sbjct: 424 QKSSKSSIEYEVGKVSEKMEEECFVEEDSKP 454
>AJ011936-1|CAB41353.1| 66|Caenorhabditis elegans cyclic
AMP-dependent protein kinasecatalytic subunit protein.
Length = 66
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +1
Query: 241 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 420
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 421 PDA 429
A
Sbjct: 63 NPA 65
>AF100307-8|AAC68937.2| 250|Caenorhabditis elegans Hypothetical
protein T12B5.13 protein.
Length = 250
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -1
Query: 526 RVLVQHPHWKGPLH-QLGVEFFLGLDSWSAHWNMHQVAILGHYHLELKEYHLEWFSLIID 350
R L+ H H++ L+ +L LD W +H L + +HL+WF + +D
Sbjct: 121 RQLMFHFHFETILNSELTARNITSLDLWKCAKKLHLYDSLLENRQIVHLFHLKWFEIQLD 180
Query: 349 NRP 341
+ P
Sbjct: 181 SFP 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,167,532
Number of Sequences: 27780
Number of extensions: 325461
Number of successful extensions: 1061
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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