Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_P10
(1041 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.048
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.048
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.048
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 35 0.083
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 35 0.083
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 34 0.19
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 33 0.25
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.59
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 32 0.59
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.4
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 31 1.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.4
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 3.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 3.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 3.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 4.1
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 7.2
U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal prote... 29 7.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 7.2
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 9.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 9.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 9.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 9.6
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 9.6
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 9.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.048
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 490 PPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PPPP PP R G+ PPP G G G PPPP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPP 300
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/80 (28%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = -1
Query: 621 GXPPXXXPPPXXPXXXGGGXEXXXXXXG-PPPXXXGXXGXPGGGGDQXKXXXYXKXRPXP 445
G PP PP P G G G PPP G P G P P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS------------PPP 282
Query: 444 PRXXGGXXXXGXKTPXXPPP 385
P G +P PPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPP 302
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 493 PPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PP P PP +G PPP G G PPPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.048
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 490 PPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PPPP PP R G+ PPP G G G PPPP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPP 321
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/80 (28%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = -1
Query: 621 GXPPXXXPPPXXPXXXGGGXEXXXXXXG-PPPXXXGXXGXPGGGGDQXKXXXYXKXRPXP 445
G PP PP P G G G PPP G P G P P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS------------PPP 303
Query: 444 PRXXGGXXXXGXKTPXXPPP 385
P G +P PPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPP 323
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 493 PPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PP P PP +G PPP G G PPPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.048
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 490 PPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PPPP PP R G+ PPP G G G PPPP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPP 306
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/80 (28%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = -1
Query: 621 GXPPXXXPPPXXPXXXGGGXEXXXXXXG-PPPXXXGXXGXPGGGGDQXKXXXYXKXRPXP 445
G PP PP P G G G PPP G P G P P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS------------PPP 288
Query: 444 PRXXGGXXXXGXKTPXXPPP 385
P G +P PPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPP 308
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 493 PPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PP P PP +G PPP G G PPPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG--SPPPPRTGSPPPPP 282
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 35.1 bits (77), Expect = 0.083
Identities = 29/94 (30%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Frame = -1
Query: 627 GGGXPPXXXPPPXXPXXXG-GGXEXXXXXXGP--PPXXXGXXGXPGGGGDQXKXXXYXKX 457
G G PP P P G G + GP PP G G PG G + Y K
Sbjct: 207 GDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTY-KT 265
Query: 456 RPXPPRXXGGXXXXGXKTPXXP--PPX*XGKXGG 361
P G G P PP GK GG
Sbjct: 266 EVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGG 299
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 35.1 bits (77), Expect = 0.083
Identities = 29/94 (30%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Frame = -1
Query: 627 GGGXPPXXXPPPXXPXXXG-GGXEXXXXXXGP--PPXXXGXXGXPGGGGDQXKXXXYXKX 457
G G PP P P G G + GP PP G G PG G + Y K
Sbjct: 188 GDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTY-KT 246
Query: 456 RPXPPRXXGGXXXXGXKTPXXP--PPX*XGKXGG 361
P G G P PP GK GG
Sbjct: 247 EVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGG 280
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Frame = -1
Query: 633 GXGGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPP--PXXXGXXGXPGGGGDQXKXXXYXK 460
G G PP PP G GPP G G PGG G
Sbjct: 250 GPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAA 309
Query: 459 XRPXPPRXXGGXXXXG 412
P PPR G G
Sbjct: 310 YCPCPPRTPAGGGGGG 325
Score = 28.7 bits (61), Expect = 7.2
Identities = 24/92 (26%), Positives = 25/92 (27%), Gaps = 1/92 (1%)
Frame = -1
Query: 633 GXGGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGGGDQXKXXXYXKXR 454
G G PP P P P G P PGG G
Sbjct: 205 GDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGP----- 259
Query: 453 PXPPRXXGGXXXXGXKTPXXP-PPX*XGKXGG 361
P PP G P P PP G+ GG
Sbjct: 260 PGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGG 291
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 33.5 bits (73), Expect = 0.25
Identities = 22/84 (26%), Positives = 26/84 (30%)
Frame = -1
Query: 615 PPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGGGDQXKXXXYXKXRPXPPRX 436
PP P P G PP G G PG GGD + + P PR
Sbjct: 146 PPGRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRG 205
Query: 435 XGGXXXXGXKTPXXPPPX*XGKXG 364
G + PP G+ G
Sbjct: 206 EPGTEYKPGQPGRPGPPGPRGEAG 229
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.59
Identities = 27/91 (29%), Positives = 27/91 (29%)
Frame = -1
Query: 633 GXGGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGGGDQXKXXXYXKXR 454
G GGG PPP P GG G G G GGGG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG----- 97
Query: 453 PXPPRXXGGXXXXGXKTPXXPPPX*XGKXGG 361
GG G P PPP G GG
Sbjct: 98 ----GCGGGGGCGGGCAPPPPPPACGGGCGG 124
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -1
Query: 633 GXGGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGGG 490
G GGG PPP P GGG G G G GGGG
Sbjct: 100 GGGGGCGGGCAPPPPPP-ACGGGCGGGGGGCGGGCGGGGGGGCGGGGG 146
Score = 23.8 bits (49), Expect(2) = 8.3
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 584 GXXGGGXXXGGXPPPXP 634
G GGG GG PP P
Sbjct: 98 GCGGGGGCGGGCAPPPP 114
Score = 23.0 bits (47), Expect(2) = 8.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 530 GGGPXXXXXXSXPPPKXXGXXGGG 601
GGG PPP G GGG
Sbjct: 45 GGGCGGGCAPPPPPPACGGGCGGG 68
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 32.3 bits (70), Expect = 0.59
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Frame = -1
Query: 627 GGGXPPXXXPPPXXPXXXGG----GXEXXXXXXGPP--PXXXGXXGXPGGGGDQXKXXXY 466
G P P P GG G G P P G G PG GG + +
Sbjct: 146 GAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPG 205
Query: 465 XKXRPXPPRXXGGXXXXG 412
RP PP GG G
Sbjct: 206 PSGRPGPPGPAGGPGQPG 223
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +1
Query: 478 FXLVPPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
F + PP P PP GG PPP G GG PPPP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPP------PPPMFAGGIPPPPPMMGGIPPPP 108
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 769 GGXXGGXPX*XXPXXXXGXPXXFXGXRPPXXXXXXXXXXXXXFPXRXGGGXPPXXXAXPX 590
GG P P G P G PP P GG PP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 589 VPPPFXGGGXXXXXXXGPP 533
PPP GG PP
Sbjct: 761 PPPP--PGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +1
Query: 490 PPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PPPP P P GG PPP GG GG PPPP
Sbjct: 726 PPPPPPPGGLPPITGGP-------PPPP----PPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 769 GGXXGGXPX*XXPXXXXGXPXXFXGXRPPXXXXXXXXXXXXXFPXRXGGGXPPXXXAXPX 590
GG P P G P G PP P GG PP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 589 VPPPFXGGGXXXXXXXGPP 533
PPP GG PP
Sbjct: 761 PPPP--PGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +1
Query: 490 PPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PPPP P P GG PPP GG GG PPPP
Sbjct: 726 PPPPPPPGGLPPITGGP-------PPPP----PPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 769 GGXXGGXPX*XXPXXXXGXPXXFXGXRPPXXXXXXXXXXXXXFPXRXGGGXPPXXXAXPX 590
GG P P G P G PP P GG PP P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 589 VPPPFXGGGXXXXXXXGPP 533
PPP GG PP
Sbjct: 344 PPPP--PGGCPPPPPPPPP 360
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +1
Query: 490 PPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
PPPP P P GG PPP GG GG PPPP
Sbjct: 309 PPPPPPPGGLPPITGGP-------PPPP----PPGGLPPISGGPPPPP 345
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = -1
Query: 627 GGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPP--PXXXGXXGXPGGGGDQXKXXXYXKXR 454
G PP PP P G GPP P G G PG GD +
Sbjct: 228 GAAGPPGPPGPPGSPGENTEGAPGLDGPLGPPGKPGTPGTDGAPGVFGDDGVPGQDAQYC 287
Query: 453 PXPPR 439
PPR
Sbjct: 288 QCPPR 292
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +1
Query: 487 VPPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
VPPPP P PP G A PPP G G PPPP
Sbjct: 608 VPPPP--PPPPPQSFGMAPISSAA-PPPPPPPPPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +1
Query: 487 VPPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
VPPPP P PP G A PPP G G PPPP
Sbjct: 434 VPPPP--PPPPPQSFGMAPISSAA-PPPPPPPPPMGLPAVGAGAPPPPP 479
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 530 GGGPXXXXXXSXPPPKXXGXXGGGXXXGGXPPPXPXXK 643
GGGP PP + G GGG G PP P K
Sbjct: 615 GGGPGGPGGGGGPP-RGPGGGGGGGPTGPPAPPKPPAK 651
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 530 GGGPXXXXXXSXPPPKXXGXXGGGXXXGGXPPPXPXXK 643
GGGP PP + G GGG G PP P K
Sbjct: 615 GGGPGGPGGGGGPP-RGPGGGGGGGPTGPPAPPKPPAK 651
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 627 GGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGGG 490
G G PP P G G G PP G G PGG G
Sbjct: 170 GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 627 GGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGGG 490
G G PP P G G G PP G G PGG G
Sbjct: 450 GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 490 PPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPPG 636
PPPP F PPP G G G PPPPG
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPG 415
Score = 29.1 bits (62), Expect = 5.5
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +1
Query: 394 GXXGFXPXXXXXPXXPGGXGPXFXIXXXFXLVPPPPRXPXXPPXXRGGAXXXXXXFXPPP 573
G G+ P P PG GP F PPPP P G PPP
Sbjct: 405 GPGGYGPPPPGGPGAPGSYGPPQGGPGGFG--PPPPGGPGAYGPPPTGFPPVG---APPP 459
Query: 574 XXXGXXGGXXXXXG 615
G GG G
Sbjct: 460 GAAGAPGGNPFARG 473
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +1
Query: 454 PXFXIXXXFXLVPPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPP 630
P + F PPPPR PP F PPP G G PPP
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHF----GMGPPRGFMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +1
Query: 454 PXFXIXXXFXLVPPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPP 630
P + F PPPPR PP F PPP G G PPP
Sbjct: 285 PYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHF----GMGPPRGFMPPP 339
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -1
Query: 633 GXGGGXPPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGG 493
G GGG PPP GG P G PGGG
Sbjct: 23 GGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQPGGG 69
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 531 GGGPXXXXXXXPPPXXGGGTXGXAXQXGG 617
GGG PPP GGG G A GG
Sbjct: 22 GGGGGGCCAPPPPPPCGGGCGGGAPAAGG 50
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 5.5
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = -1
Query: 633 GXGGGXPPXXXP-PPXXPXXXGGGXEXXXXXXGPP-PXXXGXXGXPGGGGDQXKXXXYXK 460
G GG P P PP P GG GPP P P G G + +
Sbjct: 145 GAVGGPGPKGPPGPPGGPGELGG--PGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTR 202
Query: 459 XRPXPPRXXGGXXXXGXKTPXXPPP 385
P PP G G +P P P
Sbjct: 203 SAPSPPGQPGQPGEPG--SPGEPGP 225
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 5.5
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = -1
Query: 633 GXGGGXPPXXXP-PPXXPXXXGGGXEXXXXXXGPP-PXXXGXXGXPGGGGDQXKXXXYXK 460
G GG P P PP P GG GPP P P G G + +
Sbjct: 145 GAVGGPGPKGPPGPPGGPGELGG--PGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTR 202
Query: 459 XRPXPPRXXGGXXXXGXKTPXXPPP 385
P PP G G +P P P
Sbjct: 203 SAPSPPGQPGQPGEPG--SPGEPGP 225
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.1 bits (62), Expect = 5.5
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +1
Query: 484 LVPPP-PRXPXXPPXXRGGAXXXXXXFXP-PPXXXGXXGGXXXXXGGXPPPPGXEXH 648
L PPP P P PP G P PP G GG G P P G H
Sbjct: 141 LTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQP--GQPGPHGPNGH 195
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 7.2
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = -1
Query: 573 GGGXEXXXXXXGPPPXXXGXXG--XPGGGGDQXKXXXYXKXRPXPP 442
GGG GPPP G GGGG + Y P PP
Sbjct: 58 GGGFGGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPP 103
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -1
Query: 633 GXGGGXPPXXXPPPXXPXXXGGGXEXXXXXXG--PPPXXXGXXGXPGGGG 490
G GGG P PP GGG G PPP G GGGG
Sbjct: 43 GGGGGCAP---PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -1
Query: 633 GXGGGXPPXXXPPPXXPXXXGGGXEXXXXXXG--PPPXXXGXXGXPGGGG 490
G GGG P PP GGG G PPP G GGGG
Sbjct: 43 GGGGGCAP---PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = +1
Query: 430 PXXPGGXGPXFXIXXXFXLVPPPPRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXX 609
P PG GP PP P PP G A P P G
Sbjct: 128 PGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGPQGDAGTSGQDGV 187
Query: 610 XGGXPPPPG 636
G P PPG
Sbjct: 188 P-GLPGPPG 195
>U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 25 protein.
Length = 117
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 765 PPXKGPKPGXXPXGKXKEGXXG 830
PP K PK G P K KEG G
Sbjct: 2 PPKKDPKGGKAPPSKKKEGSGG 23
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 7.2
Identities = 26/90 (28%), Positives = 28/90 (31%), Gaps = 6/90 (6%)
Frame = -1
Query: 615 PPXXXPPPXXPXXXGG--GXEXXXXXXGPP--PXXXGXXGXPGGGGDQXKXXXYXKXRP- 451
PP P P P G G + GPP P G G PG G K P
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPA 193
Query: 450 XPPRXXGGXXXXGXKTPXXP-PPX*XGKXG 364
PP G P P P G+ G
Sbjct: 194 GPPGENGNNGEPQPGAPGEPGQPGQPGQRG 223
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/79 (26%), Positives = 25/79 (31%)
Frame = -1
Query: 597 PPXXPXXXGGGXEXXXXXXGPPPXXXGXXGXPGGGGDQXKXXXYXKXRPXPPRXXGGXXX 418
PP P G E PP G G PG G + + +P P G
Sbjct: 162 PPGPPGPEGPNGEPGNKGPAGPP---GPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQ 218
Query: 417 XGXKTPXXPPPX*XGKXGG 361
G + P P G GG
Sbjct: 219 PGQRGPAGEPGK-DGSPGG 236
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 6/69 (8%)
Frame = -1
Query: 627 GGGXPPXXXPPPXXPXXXGG-GXEXXXXXXGPP-----PXXXGXXGXPGGGGDQXKXXXY 466
G PP P P GG G + GPP P G G PG G
Sbjct: 218 GPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPGSPGGPGLPGND 277
Query: 465 XKXRPXPPR 439
P PPR
Sbjct: 278 AAYCPCPPR 286
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 499 PRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
P+ P PP GG PPP G PPPP
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 499 PRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
P+ P PP GG PPP G PPPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 499 PRXPXXPPXXRGGAXXXXXXFXPPPXXXGXXGGXXXXXGGXPPPP 633
P+ P PP GG PPP G PPPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Frame = -1
Query: 633 GXGGGX----PPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXG-XPGGGGDQXKXXX 469
G GGG P PPP P GGG GP P P G G Q
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGA 109
Query: 468 Y 466
Y
Sbjct: 110 Y 110
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
Frame = -1
Query: 633 GXGGGX----PPXXXPPPXXPXXXGGGXEXXXXXXGPPPXXXGXXG-XPGGGGDQXKXXX 469
G GGG P PPP P GGG GP P P G G Q
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGA 109
Query: 468 Y 466
Y
Sbjct: 110 Y 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,811,758
Number of Sequences: 27780
Number of extensions: 252187
Number of successful extensions: 1494
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2762030832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -