Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_P08
(866 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 120 5e-26
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 110 5e-23
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 82 2e-14
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 64 6e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 46 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.004
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.082
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 38 0.33
UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;... 36 1.8
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.1
UniRef50_A0H3Q9 Cluster: Restriction endonuclease; n=1; Chlorofl... 34 4.1
UniRef50_Q9K456 Cluster: Putative membrane protein; n=2; Strepto... 34 5.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.4
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 33 7.1
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 120 bits (289), Expect = 5e-26
Identities = 51/56 (91%), Positives = 52/56 (92%)
Frame = +3
Query: 630 PWKLPRCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCXSFAPSWAVCTNP 797
P + P CALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRC SFAPSWAVCTNP
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 89.4 bits (212), Expect = 1e-16
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = +2
Query: 488 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 646
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 54
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 110 bits (264), Expect = 5e-23
Identities = 65/109 (59%), Positives = 70/109 (64%)
Frame = +2
Query: 320 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 499
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 500 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 646
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APS
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPS 122
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 82.2 bits (194), Expect = 2e-14
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +2
Query: 506 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 646
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APS
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPS 90
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 78.2 bits (184), Expect = 3e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 647 LRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 757
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 496 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 383
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 63.7 bits (148), Expect = 6e-09
Identities = 33/67 (49%), Positives = 39/67 (58%)
Frame = -1
Query: 797 GVRAHSPAWSERXTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESATRELPGGNAW 618
GVRA+SPAWSER P+ DT SVSYEKAPRFPKG++ + A G +
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
Query: 617 YLYSPVG 597
SPVG
Sbjct: 87 ASLSPVG 93
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 296 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 463
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 395 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 568
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 569 IDAQVRGGETRQDYKDTRRFPLEAPS 646
I Q + +T+ +YK T FPL++PS
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPS 107
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 45.6 bits (103), Expect = 0.002
Identities = 27/63 (42%), Positives = 30/63 (47%)
Frame = +3
Query: 609 IKIPGVSPWKLPRCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCXSFAPSWAVC 788
+KI VS LP P PPFSL + + GIS RC SFAPSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 789 TNP 797
NP
Sbjct: 92 KNP 94
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 415 HSKAVIRLSTESGDNAGKNM 474
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 222 INKLTTTIAFILCFRFRVXVWEVFSALMNRPTRGERRFAYW 344
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 366 ERGSGRAPNTQTASPRALADSLMQ 295
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 37.9 bits (84), Expect = 0.33
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1
Query: 797 GVRAHSPAWSERXTPN 750
GVRAHSPAWSER TPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_UPI0000E256C9 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 211
Score = 35.5 bits (78), Expect = 1.8
Identities = 27/89 (30%), Positives = 38/89 (42%)
Frame = -2
Query: 778 QLGANDXHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAQRGSFQGETPGIFIVLS 599
Q A + + ++P R+ R GG+ GKR+ R R+ + G +
Sbjct: 65 QRAAKEGEKGKLPLGGRRRRSETGRGTAGGREGGKRRERGARSSSRHRPRQIRGRGEAQA 124
Query: 598 GFATSDLSVDFCDARQGGGAYGKTPATRP 512
+ S D DA QGG A GK PA RP
Sbjct: 125 R-PRQEASGD--DATQGGRARGKPPAARP 150
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.1
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -2
Query: 727 MRKRHASRREKGGQVSGKRQGRN--RRAQRG 641
+R+R A RR GG+ G+R+GRN RR QRG
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQQRG 385
>UniRef50_A0H3Q9 Cluster: Restriction endonuclease; n=1;
Chloroflexus aggregans DSM 9485|Rep: Restriction
endonuclease - Chloroflexus aggregans DSM 9485
Length = 359
Score = 34.3 bits (75), Expect = 4.1
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 530 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSLRSPVPTLP 673
FSI P+ SI +I V GET + +R +P+L+S VP P
Sbjct: 213 FSISGPPVISIDRIGQLVPVGETNGERATSRSLGTNSPTLQSTVPNRP 260
>UniRef50_Q9K456 Cluster: Putative membrane protein; n=2;
Streptomyces|Rep: Putative membrane protein -
Streptomyces coelicolor
Length = 314
Score = 33.9 bits (74), Expect = 5.4
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = -2
Query: 772 GANDXHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAQRGSFQGETPGIFIVLSG 596
G D + E PTA + K EKGG+ GK +G++ + GS PG F G
Sbjct: 83 GTGDAPKEE-PTA-SPAKEKGETDEKGGKDEGKGKGQDEKPDPGSIPSSGPGTFATADG 139
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 505 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 383
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 797 GVRAHSPAWSERXTPN*DT 741
GV A+SPAWSER TP+ DT
Sbjct: 27 GVLAYSPAWSERPTPSRDT 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,250,309
Number of Sequences: 1657284
Number of extensions: 15737524
Number of successful extensions: 46957
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 44516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46918
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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