Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_P08
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.68 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.68 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.6  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   4.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 613 RYQAFPPGSSLVALSCSDPAAYRIPVRL 696
           +YQ  P    + + S  DPA YRI  R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 613 RYQAFPPGSSLVALSCSDPAAYRIPVRL 696
           +YQ  P    + + S  DPA YRI  R+
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYKRI 425


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 295 EKTSHTXTLNLKHKMNAIVVV 233
           E    T TLNLKH   A++V+
Sbjct: 56  EDAEDTQTLNLKHLRAAVLVL 76


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 638 APSLRSPVPTLPLTG 682
           AP    P+P+LPL G
Sbjct: 468 APCFEEPLPSLPLPG 482


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
 Frame = +2

Query: 470 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 643
           T      +R   V +PR   WR +I S           ++  G + +D+K TR       
Sbjct: 382 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTE 441

Query: 644 SLRSPVPTLP 673
           +LR  V   P
Sbjct: 442 ALRRFVEGYP 451


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
 Frame = +2

Query: 470 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 643
           T      +R   V +PR   WR +I S           ++  G + +D+K TR       
Sbjct: 297 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTE 356

Query: 644 SLRSPVPTLP 673
           +LR  V   P
Sbjct: 357 ALRRFVEGYP 366


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
 Frame = +2

Query: 470 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 643
           T      +R   V +PR   WR +I S           ++  G + +D+K TR       
Sbjct: 616 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQVTE 675

Query: 644 SLRSPVPTLP 673
           +LR  V   P
Sbjct: 676 ALRRFVEGYP 685


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,149
Number of Sequences: 438
Number of extensions: 4884
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)