Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_P06
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding...    57   2e-08
Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical pr...    56   5e-08
AF003141-5|AAK21486.1|  136|Caenorhabditis elegans Lipid binding...    55   6e-08
AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding...    53   2e-07
AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding...    53   2e-07
Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical pr...    51   1e-06
U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z82060-2|CAB04882.1|  421|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U40420-7|AAA81434.1|  159|Caenorhabditis elegans Lipid binding p...    29   4.5  

>AF003141-3|AAK21484.1|  135|Caenorhabditis elegans Lipid binding
           protein protein 6 protein.
          Length = 135

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
 Frame = +3

Query: 324 GKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFK 503
           G+++   +E+ ++Y   VGV  + RK  +   P +EI ++GD       S  +     FK
Sbjct: 7   GRWKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFK 66

Query: 504 LGEEYEEKMPNS-IIKSVTTITNDSEMETKSVIPDTGAKCGRHYQFTDEECIVTLTHENA 680
           LG+E++E  P+   +KSV    N   +  +  I D+  K     ++ + + ++T     +
Sbjct: 67  LGQEFDETTPDGRTVKSVVNFENGKFIHIQKKIKDSD-KESIITRWLEGDKLITTLESGS 125

Query: 681 SVSGKRYFR 707
            VS + Y R
Sbjct: 126 VVSRREYVR 134


>Z81127-2|CAB03387.1|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.2 protein.
          Length = 137

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 24/76 (31%), Positives = 41/76 (53%)
 Frame = +3

Query: 309 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 488
           M    G+++  + E+ D+Y   +GV  + RK  +   P++EI +DG+T      S  +  
Sbjct: 4   MNDFIGRWKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNT 63

Query: 489 EHKFKLGEEYEEKMPN 536
           +  FKLGEE+ E  P+
Sbjct: 64  KLSFKLGEEFVENSPD 79


>AF003141-5|AAK21486.1|  136|Caenorhabditis elegans Lipid binding
           protein protein 5 protein.
          Length = 136

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
 Frame = +3

Query: 324 GKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFK 503
           G+++  ++E+ +DY   VGV  + RK    + P +EI ++G+   +   S  +    +F 
Sbjct: 8   GRWKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFT 67

Query: 504 LGEEYEEKMPNS-IIKSVTTITNDSEMETKSVIPDTGAKCGRHYQFTDEECIVTLTHENA 680
           LG E++E  P+    KS  TI +   +  +  I D+         F  E+ I TL    +
Sbjct: 68  LGVEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTL-QSGS 126

Query: 681 SVSGKRYFR 707
            +S + Y R
Sbjct: 127 VISRRAYIR 135


>AC024771-9|ABA61863.1|  137|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform b protein.
          Length = 137

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +3

Query: 318 IAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHK 497
           + GK+    +E+ D+Y   VGV +  R + + + P +E +++GD  T+ ++S  +    K
Sbjct: 7   LVGKWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLK 66

Query: 498 FKLGEEYEEKMPNS-IIKSVTTITND 572
           +KLG   +EK  +   + SV +I ND
Sbjct: 67  WKLGTASDEKTADGRDVSSVFSIEND 92


>AC024771-8|AAK70656.1|  152|Caenorhabditis elegans Lipid binding
           protein protein 9,isoform a protein.
          Length = 152

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +3

Query: 318 IAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHK 497
           + GK+    +E+ D+Y   VGV +  R + + + P +E +++GD  T+ ++S  +    K
Sbjct: 22  LVGKWNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLK 81

Query: 498 FKLGEEYEEKMPNS-IIKSVTTITND 572
           +KLG   +EK  +   + SV +I ND
Sbjct: 82  WKLGTASDEKTADGRDVSSVFSIEND 107


>Z81127-7|CAB03391.2|  137|Caenorhabditis elegans Hypothetical
           protein T22G5.6 protein.
          Length = 137

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/76 (30%), Positives = 42/76 (55%)
 Frame = +3

Query: 309 MPSIAGKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTV 488
           M    G+++   +E+ ++Y   +GV  + RK  S++SP +EI +DGDT      S  +  
Sbjct: 4   MKEFIGRWKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNN 63

Query: 489 EHKFKLGEEYEEKMPN 536
           +  FK+ E++ E  P+
Sbjct: 64  KLAFKIREKFVEIAPD 79


>U28991-8|AAM22060.1|  517|Caenorhabditis elegans Hypothetical
           protein F08F8.9c protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
 Frame = +3

Query: 375 VGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSV 554
           +GVP   RK+ S   P      DG      NS+   TV +  +  EE +EK P    +  
Sbjct: 13  IGVPLEARKLPSARIPKKPKETDG------NST--ETVVNSTEKPEERKEKPPKPPKQKQ 64

Query: 555 TTITNDSEMETKSVIPDTGAKCGRHYQF-TDEECIVTLTHENA 680
               N +    K++I DTG     +  F  +EE  +TL  + A
Sbjct: 65  KQKQNLNNKFLKNLITDTGKPASMNGLFVAEEEAKLTLLEKKA 107


>U28991-7|AAK68312.1|  626|Caenorhabditis elegans Hypothetical
           protein F08F8.9a protein.
          Length = 626

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
 Frame = +3

Query: 375 VGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSV 554
           +GVP   RK+ S   P      DG      NS+   TV +  +  EE +EK P    +  
Sbjct: 13  IGVPLEARKLPSARIPKKPKETDG------NST--ETVVNSTEKPEERKEKPPKPPKQKQ 64

Query: 555 TTITNDSEMETKSVIPDTGAKCGRHYQF-TDEECIVTLTHENA 680
               N +    K++I DTG     +  F  +EE  +TL  + A
Sbjct: 65  KQKQNLNNKFLKNLITDTGKPASMNGLFVAEEEAKLTLLEKKA 107


>U28991-6|AAK68313.1|  624|Caenorhabditis elegans Hypothetical
           protein F08F8.9b protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
 Frame = +3

Query: 375 VGVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSV 554
           +GVP   RK+ S   P      DG      NS+   TV +  +  EE +EK P    +  
Sbjct: 13  IGVPLEARKLPSARIPKKPKETDG------NST--ETVVNSTEKPEERKEKPPKPPKQKQ 64

Query: 555 TTITNDSEMETKSVIPDTGAKCGRHYQF-TDEECIVTLTHENA 680
               N +    K++I DTG     +  F  +EE  +TL  + A
Sbjct: 65  KQKQNLNNKFLKNLITDTGKPASMNGLFVAEEEAKLTLLEKKA 107


>Z82060-2|CAB04882.1|  421|Caenorhabditis elegans Hypothetical
           protein T27F6.2 protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 668 CKSHNTFFISKLIVTSTFSACVRYNRFCLHFTIIGDCCDTFYNGIG 531
           C+S +  +I +L +T T +    YN +C  F+   +  +TF +  G
Sbjct: 143 CESQHVAYICELPITYTDNCDFNYNGYCYTFSSTTNSINTFISAQG 188


>U40420-7|AAA81434.1|  159|Caenorhabditis elegans Lipid binding
           protein protein 1 protein.
          Length = 159

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 26/134 (19%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
 Frame = +3

Query: 324 GKYQHYKNEDIDDYFSAVGVPFMGRKMMSMSS--PLMEISIDGDTMTIKNSSLLRTVEHK 497
           G +    +E+ D+Y +A G  +  RK+++ ++   +   + + +     N +  + V +K
Sbjct: 26  GTFDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYK 85

Query: 498 -FKLGEEYEEKMPNSIIKSVTTITNDSEM-ETKSVIPDTGAKCGRHYQFTDEECIVTLTH 671
             +LG+ ++ +  +S    +T    D  + E    +    AK   +    D+E ++    
Sbjct: 86  NVQLGKAFQGEGLDSTKHEITFTLKDGHLFEHHKPLEGGDAKEETYEYLFDKEFLLVRMS 145

Query: 672 ENASVSGKRYFRRV 713
            N  V G+R+++R+
Sbjct: 146 FN-GVEGRRFYKRL 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,865,416
Number of Sequences: 27780
Number of extensions: 338086
Number of successful extensions: 647
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)