Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_P04
         (864 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    188   2e-49
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.2  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  188 bits (458), Expect = 2e-49
 Identities = 95/111 (85%), Positives = 96/111 (86%)
 Frame = +2

Query: 374 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 553
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 554 IQKESTLHLVXXXXXXXXIFVKTLTGKXITLEVKXSDXIENVXAXXXDKEG 706
           IQKESTLHLV        IFVKTLTGK ITLEV+ SD IENV A   DKEG
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 111



 Score =  188 bits (458), Expect = 2e-49
 Identities = 95/111 (85%), Positives = 96/111 (86%)
 Frame = +2

Query: 374 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 553
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 554 IQKESTLHLVXXXXXXXXIFVKTLTGKXITLEVKXSDXIENVXAXXXDKEG 706
           IQKESTLHLV        IFVKTLTGK ITLEV+ SD IENV A   DKEG
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 187



 Score =  145 bits (351), Expect = 2e-36
 Identities = 70/70 (100%), Positives = 70/70 (100%)
 Frame = +2

Query: 374 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 553
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 554 IQKESTLHLV 583
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 221 CLSRCNPLVF*CVSEXEDKPF 159
           CL+R NPL   C++  E KPF
Sbjct: 95  CLTRTNPLRKLCIAIVEWKPF 115



 Score = 25.0 bits (52), Expect = 3.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 565  FFLNVVV*QGASVFQLLASKDETLLIRRNSF 473
            FF+  V+  G  VF  +A  DET + R N+F
Sbjct: 1320 FFIYAVI--GMQVFGKIAMDDETSIHRNNNF 1348


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,821
Number of Sequences: 2352
Number of extensions: 12543
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)