Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_O20
         (1113 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    27   1.7  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    27   1.7  
Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical pr...    25   2.9  
Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical pr...    25   4.3  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    24   4.8  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    24   4.8  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    24   4.9  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    24   4.9  

>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 26.6 bits (56), Expect(2) = 1.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 799 PPPPPPPP 776
           PPPPPPPP
Sbjct: 766 PPPPPPPP 773



 Score = 22.6 bits (46), Expect(2) = 1.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 805 KXPPPPPP 782
           K PPPPPP
Sbjct: 722 KTPPPPPP 729


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 26.6 bits (56), Expect(2) = 1.7
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 799 PPPPPPPP 776
           PPPPPPPP
Sbjct: 766 PPPPPPPP 773



 Score = 22.6 bits (46), Expect(2) = 1.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 805 KXPPPPPP 782
           K PPPPPP
Sbjct: 722 KTPPPPPP 729


>Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical
           protein F36G9.13 protein.
          Length = 917

 Score = 25.4 bits (53), Expect(2) = 2.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 805 KXPPPPPPP 779
           K PPPPPPP
Sbjct: 845 KVPPPPPPP 853



 Score = 23.0 bits (47), Expect(2) = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 799 PPPPPPPP 776
           PPPPPP P
Sbjct: 848 PPPPPPVP 855


>Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical
           protein T23G5.3 protein.
          Length = 262

 Score = 25.4 bits (53), Expect(2) = 4.3
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 805 KXPPPPPPP 779
           K PPPPPPP
Sbjct: 140 KPPPPPPPP 148



 Score = 22.6 bits (46), Expect(2) = 4.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 799 PPPPPPPP 776
           PPPPPP P
Sbjct: 143 PPPPPPLP 150


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 23.8 bits (49), Expect(2) = 4.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 799 PPPPPPP 779
           PPPPPPP
Sbjct: 726 PPPPPPP 732



 Score = 23.8 bits (49), Expect(2) = 4.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 796 PPPPPPP 776
           PPPPPPP
Sbjct: 742 PPPPPPP 748


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 23.8 bits (49), Expect(2) = 4.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 799 PPPPPPP 779
           PPPPPPP
Sbjct: 726 PPPPPPP 732



 Score = 23.8 bits (49), Expect(2) = 4.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 796 PPPPPPP 776
           PPPPPPP
Sbjct: 742 PPPPPPP 748


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 23.8 bits (49), Expect(2) = 4.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 799 PPPPPPP 779
           PPPPPPP
Sbjct: 309 PPPPPPP 315



 Score = 23.8 bits (49), Expect(2) = 4.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 796 PPPPPPP 776
           PPPPPPP
Sbjct: 325 PPPPPPP 331


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 23.8 bits (49), Expect(2) = 4.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 799 PPPPPPP 779
           PPPPPPP
Sbjct: 122 PPPPPPP 128



 Score = 23.8 bits (49), Expect(2) = 4.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 796 PPPPPPP 776
           PPPPPPP
Sbjct: 138 PPPPPPP 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,225,447
Number of Sequences: 27780
Number of extensions: 87687
Number of successful extensions: 2553
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 2994689446
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)