Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_O19
         (925 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     121   3e-27
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   121   3e-27
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   121   3e-27
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   121   3e-27
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   121   3e-27
AF419855-1|AAP97290.1|  820|Homo sapiens Ser/Arg-related nuclear...    33   1.5  
AF048977-1|AAC09321.1|  820|Homo sapiens Ser/Arg-related nuclear...    33   1.5  

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/81 (76%), Positives = 65/81 (80%)
 Frame = +1

Query: 184 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 363
           VRDKLNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 364 VVQHHGQVIYTRATKGDDPVA 426
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/81 (76%), Positives = 65/81 (80%)
 Frame = +1

Query: 184 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 363
           VRDKLNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 364 VVQHHGQVIYTRATKGDDPVA 426
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/81 (76%), Positives = 65/81 (80%)
 Frame = +1

Query: 184 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 363
           VRDKLNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 364 VVQHHGQVIYTRATKGDDPVA 426
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/81 (76%), Positives = 65/81 (80%)
 Frame = +1

Query: 184 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 363
           VRDKLNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 364 VVQHHGQVIYTRATKGDDPVA 426
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  121 bits (292), Expect = 3e-27
 Identities = 62/81 (76%), Positives = 65/81 (80%)
 Frame = +1

Query: 184 VRDKLNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQ 363
           VRDKLNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 364 VVQHHGQVIYTRATKGDDPVA 426
           V +H  QVIYTR TKG D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>AF419855-1|AAP97290.1|  820|Homo sapiens Ser/Arg-related nuclear
           matrix protein protein.
          Length = 820

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 77  PRRTRRLRPNSLKKHRXXRKDPVAAKPRRRSGP 175
           PR+TRRL P++    R  R  P A  P+ R  P
Sbjct: 381 PRKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413


>AF048977-1|AAC09321.1|  820|Homo sapiens Ser/Arg-related nuclear
           matrix protein protein.
          Length = 820

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 77  PRRTRRLRPNSLKKHRXXRKDPVAAKPRRRSGP 175
           PR+TRRL P++    R  R  P A  P+ R  P
Sbjct: 381 PRKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,961,033
Number of Sequences: 237096
Number of extensions: 1522318
Number of successful extensions: 2886
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2879
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)