Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_O18
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043...    30   2.9  
05_03_0149 - 8935172-8935254,8935792-8937319                           29   3.8  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    29   5.1  
02_01_0542 + 3971675-3971845,3973791-3973865,3974129-3974608           29   6.7  

>06_03_1014 -
           26902971-26903085,26903182-26903270,26904302-26904380,
           26904488-26904585,26904848-26904952,26905031-26905117,
           26905218-26905412,26905890-26905996,26906559-26906754,
           26906865-26906966,26907100-26907171,26907404-26907505,
           26907638-26907675,26907769-26907880,26907972-26908028,
           26908122-26908177,26908283-26908409,26908856-26908910,
           26908919-26909049
          Length = 640

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +3

Query: 474 EVVMHHP*LAVALDEGVEESFLKLSPSCAHVQKLSHLRKVLRVLPWILLANYF 632
           EV+M  P L + L +G EES +K +   A+   +    +   +   I +A YF
Sbjct: 305 EVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYF 357


>05_03_0149 - 8935172-8935254,8935792-8937319
          Length = 536

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -2

Query: 622 ASKIQGSTRSTFLRCDSFWTCAQDGDSFRKDSSTPSSRATANYG 491
           A    G T+ST+  C  F T A +  + R  S  P S     YG
Sbjct: 9   ALSTDGCTKSTYTECHGFTTPAAEDRALRGTSPRPPSSFLLRYG 52


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +1

Query: 430 ATTHAKIRTGTPFIWRW*CIIRSWPWLSTRGWK 528
           +++H+++   T + WRW  I R + W   RG++
Sbjct: 55  SSSHSRVSDETLWQWRWRQITRPYSWRCRRGFR 87


>02_01_0542 + 3971675-3971845,3973791-3973865,3974129-3974608
          Length = 241

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 447 FCMRCCTSISPGCS 406
           FC+ CCTSI P C+
Sbjct: 34  FCLACCTSICPHCA 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,742,024
Number of Sequences: 37544
Number of extensions: 390134
Number of successful extensions: 1045
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)