Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_O18
         (902 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.                  30   10.0 
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai...    30   10.0 
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai...    30   10.0 
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr...    30   10.0 
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.                30   10.0 

>Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.
          Length = 477

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +1

Query: 247 TSRPIT-TIYATWS*TSTSIWLGTTIQCSSSKSWCPDTNSTSGSRLTPCYSHYT*TSRRY 423
           TS P T T  AT + T+++    TT    +SK+    +++TSGS  TP     T T+   
Sbjct: 239 TSFPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSSTTSGSGTTPSPVTTTSTASVS 298

Query: 424 RCATTHAKIRTGT 462
           + +T+H  +   T
Sbjct: 299 KTSTSHVSVSKTT 311


>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains
           6 protein.
          Length = 1229

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
 Frame = -3

Query: 477 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 355
           PPD +G + +F   C     C S++  C C  GV+       C  G
Sbjct: 451 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 496


>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains
           6 protein.
          Length = 1229

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
 Frame = -3

Query: 477 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 355
           PPD +G + +F   C     C S++  C C  GV+       C  G
Sbjct: 451 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 496


>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
           protein.
          Length = 1640

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
 Frame = -3

Query: 477 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 355
           PPD +G + +F   C     C S++  C C  GV+       C  G
Sbjct: 631 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 676


>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
          Length = 1246

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
 Frame = -3

Query: 477 PPDEWGPSSNFCMRC-----CTSISPGCSCVVGVTRCEARPACAVG 355
           PPD +G + +F   C     C S++  C C  GV+       C  G
Sbjct: 468 PPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG 513


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,222,322
Number of Sequences: 237096
Number of extensions: 2226629
Number of successful extensions: 4533
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4533
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)