Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_O17
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68011-5|CAB60293.1| 332|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68004-10|CAB60291.1| 332|Caenorhabditis elegans Hypothetical p... 31 1.1
U50300-5|AAC48103.2| 337|Caenorhabditis elegans Serpentine rece... 30 2.0
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 30 2.0
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68301-6|CAA92621.1| 170|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical ... 30 2.6
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF016681-3|AAB66173.1| 159|Caenorhabditis elegans Hypothetical ... 29 3.5
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 29 4.6
U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine rece... 29 6.1
AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine r... 29 6.1
AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 29 6.1
Z83128-6|CAB05638.2| 353|Caenorhabditis elegans Hypothetical pr... 28 8.1
U28992-7|AAU45230.1| 240|Caenorhabditis elegans Hypothetical pr... 28 8.1
U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical pr... 28 8.1
U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine re... 28 8.1
AC024817-12|AAY86300.1| 187|Caenorhabditis elegans Hypothetical... 28 8.1
AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine re... 28 8.1
>Z68011-5|CAB60293.1| 332|Caenorhabditis elegans Hypothetical
protein T21B6.5 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 194 INFY*CEHIFLKCEIFFLIIIFNTICLVNCT*SMSYTKFEKTIVKTIILQCIF 352
INF C + +F +I FN +CL N + Y T V T+IL +F
Sbjct: 95 INFETCIDVLPLSIVFVAMISFNNLCLRNVGVAFYYVGRSITTVFTVILTYVF 147
>Z68004-10|CAB60291.1| 332|Caenorhabditis elegans Hypothetical
protein T21B6.5 protein.
Length = 332
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 194 INFY*CEHIFLKCEIFFLIIIFNTICLVNCT*SMSYTKFEKTIVKTIILQCIF 352
INF C + +F +I FN +CL N + Y T V T+IL +F
Sbjct: 95 INFETCIDVLPLSIVFVAMISFNNLCLRNVGVAFYYVGRSITTVFTVILTYVF 147
>U50300-5|AAC48103.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein18 protein.
Length = 337
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 302 TKFEKTIVKTIILQCIFHIIRAITWYFLNFF 394
TK + T++ L C FH ++ + ++NFF
Sbjct: 252 TKMQATVLLQAFLFCFFHATSSVVYVYMNFF 282
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 516 KQEESSTQTQEIKNTPRKAKLRQDVKVLKQK 608
K E++ + QEI+ +P+K++ RQ+++ + QK
Sbjct: 957 KSEKAPEKPQEIEKSPKKSEKRQEIQEIPQK 987
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 516 KQEESSTQTQEIKNTPRKAKLRQDVKVLKQK 608
K E++ + QEI+ +P+K++ RQ+++ + QK
Sbjct: 955 KSEKAPEKPQEIEKSPKKSEKRQEIQEIPQK 985
>Z68301-6|CAA92621.1| 170|Caenorhabditis elegans Hypothetical
protein W01B6.8 protein.
Length = 170
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 638 IYNHY-FTTFKFLFQYLNILS*FCFSRGIFYFLRLST*FFLF 516
++N++ F+ F F+ QY NI S C S+ + + ++S FLF
Sbjct: 1 MFNNFPFSKFPFISQYFNITSEGCSSKIMCLYSQISIILFLF 42
>AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical
protein E03D2.4 protein.
Length = 351
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +2
Query: 242 FLIIIFNTICLVNCT*SMSYTKFEKTIVKTIILQCIFHIIRAITWYFLNFFY 397
++ + ++ I + + SM + ++ I+ ++ C FH I A + ++ FF+
Sbjct: 216 YIYLCYHLIYKIGYSSSMLLYRSKQQIIMQAVILCTFHAIAAYIYVYMQFFH 267
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 543 QEIKNTPRKAKLRQDVKVLKQKLKSREIVIVNIKSILDLLKKN 671
+EIKNT + A + + VK+L+ KLKS ++ K + + K+
Sbjct: 526 KEIKNTDKIASILRSVKILR-KLKSDRKLVEKFKEVSSAVSKS 567
>AF016681-3|AAB66173.1| 159|Caenorhabditis elegans Hypothetical
protein F22E5.9 protein.
Length = 159
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Frame = +3
Query: 492 WKMSFKKVKQEESSTQTQE-----IKNTPRKAKLRQDVKVLKQKLKSREIVIVNIKSILD 656
WK + +K + + E +KN K + D V K+KL + KS+ D
Sbjct: 7 WKKCYDSIKTVAKTVPSAEDSMKGVKNAASKMRAGVDEIVEKRKLYAESETAKLKKSLKD 66
Query: 657 LLKKNGDF*L-N*NLNCE 707
L K+N D + N NL+ E
Sbjct: 67 LSKENSDLKMQNLNLSAE 84
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 576 LRQDVKVLKQKLKSREIVIVNIKSILDLLKKNGDF 680
L ++++ +KQK+ +V +L LL+KNGDF
Sbjct: 18 LDEEIQKIKQKMIDDSQSVVLANQLLILLRKNGDF 52
>U64841-2|AAB04846.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein14 protein.
Length = 337
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 242 FLIIIFNTICLVNCT*SMSYTKFEKTIVKTIILQCIFHIIRAITWYFLNFF 394
++ + ++ I T SM K ++ I+ ++ C FH I A + ++ FF
Sbjct: 195 YIYLCYHLIFKFGYTTSMWMYKTKQQIIIQAVILCSFHAIAAYIYVYMQFF 245
>AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine
receptor, class t protein71 protein.
Length = 365
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 296 SYTKFEKTIVKTIILQCIFHIIRAITWYFLNFFY 397
S K +K I + +L CIFH I A + F++FFY
Sbjct: 207 SKKKLQKIIFQAAML-CIFHAIVAGFYDFMSFFY 239
>AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine
receptor, class t protein7 protein.
Length = 353
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 218 IFLKC-EIFFLIIIFNTICLVNCT*SMSYTKFEKTIVKTIILQCIFHIIRAITWYFLNFF 394
I + C +L + +N + + S+ K ++ I+ ++ C FH + A + F+ FF
Sbjct: 205 ILIVCTSTLYLYLSYNLLFKFGYSTSIWLYKTKRQIIFQAVILCAFHAVVAGIYEFMMFF 264
Query: 395 Y 397
Y
Sbjct: 265 Y 265
>Z83128-6|CAB05638.2| 353|Caenorhabditis elegans Hypothetical
protein W01D2.4 protein.
Length = 353
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 236 IFFLIIIFNTICLVNCT*SMSYTKFEKTIVKTIILQCIFHIIRAITWYFLNFF 394
I +L + + I + SM K ++ I+ I CIFH A + ++ FF
Sbjct: 214 ILYLYLSYRLIFKFGYSTSMWLYKTKRQIIFQAISLCIFHATAAFIYEYMQFF 266
>U28992-7|AAU45230.1| 240|Caenorhabditis elegans Hypothetical
protein T05C1.4c protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 471 TRRSSSFA*RQANDIHACVRRYSIQ*KKFKKYHVMALII*K 349
TRR R A I C RRY Q FKK H A+++ K
Sbjct: 52 TRRQEDIERRAALKIQGCYRRYK-QFCYFKKLHNAAIVVQK 91
>U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical protein
T05C1.4b protein.
Length = 1163
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 471 TRRSSSFA*RQANDIHACVRRYSIQ*KKFKKYHVMALII*K 349
TRR R A I C RRY Q FKK H A+++ K
Sbjct: 975 TRRQEDIERRAALKIQGCYRRYK-QFCYFKKLHNAAIVVQK 1014
>U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical protein
T05C1.4a protein.
Length = 1185
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 471 TRRSSSFA*RQANDIHACVRRYSIQ*KKFKKYHVMALII*K 349
TRR R A I C RRY Q FKK H A+++ K
Sbjct: 975 TRRQEDIERRAALKIQGCYRRYK-QFCYFKKLHNAAIVVQK 1014
>AF125954-6|AAD14707.2| 346|Caenorhabditis elegans Serpentine
receptor, class t protein1 protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 290 SMSYTKFEKTIVKTIILQCIFHIIRAITWYFLNFFY 397
SM K ++ I+ ++ C FH AI + F+ FFY
Sbjct: 232 SMWLYKSKRQIILQGVIICFFHAGTAIIYEFVQFFY 267
>AC024817-12|AAY86300.1| 187|Caenorhabditis elegans Hypothetical
protein Y54G2A.44 protein.
Length = 187
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = -3
Query: 259 KYYNEKKYLTF*KYMLTLVKIYQ*I*HM---EGYSTNWRGXSLKTTY---IKRVHHDYTE 98
K Y EKK +TF Y +L+K + Y T S++T + + +++Y E
Sbjct: 83 KGYAEKKAMTFIDYRYSLIKYINYLYKQAIATKYLTKEEATSMRTLFWAADAKANNNYIE 142
Query: 97 TFTIFEKKTSHKLYQXKSLKE 35
T F + S K+++ S+ +
Sbjct: 143 TTQTFMVEASQKIHKTPSIDQ 163
>AC006769-7|AAF60589.1| 346|Caenorhabditis elegans Serpentine
receptor, class t protein2 protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 290 SMSYTKFEKTIVKTIILQCIFHIIRAITWYFLNFFY 397
SM K ++ I+ ++ C FH AI + F+ FFY
Sbjct: 232 SMWLYKSKRQIILQGVIICFFHAGTAIIYEFVQFFY 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,538,775
Number of Sequences: 27780
Number of extensions: 320291
Number of successful extensions: 891
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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