Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_O17
         (912 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    24   1.7  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    24   1.7  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   5.1  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   5.1  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   5.1  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   5.1  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   5.1  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    23   5.1  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   5.1  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   5.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   5.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   5.1  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   6.7  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        22   6.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   8.9  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS+HD  FK
Sbjct: 1   MKRNISNYSYHDEKFK 16


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS+HD  FK
Sbjct: 1   MKRNISNYSYHDEKFK 16


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16



 Score = 22.2 bits (45), Expect = 6.7
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -1

Query: 708 FRNLNFNSIKNRHFSLINLK 649
           + N N+N+ K  ++++IN++
Sbjct: 341 YNNNNYNNYKKLYYNIINIE 360


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 355 MKNTLQNYSFHDCFFK 308
           MK  + NYS HD  FK
Sbjct: 1   MKRNISNYSHHDEKFK 16


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 483 WNFWKMSFKKVKQEESSTQTQEIKNTPRKAKLRQD 587
           W+F + +F  V  +E  +   E   T  KAK  Q+
Sbjct: 116 WDFQECTFISVNGKEVHSGNIEAVTTKEKAKFPQE 150


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 762 LFRIXLFIISKWTMSIIKFRNLNFNSIKN 676
           L ++ L  IS W M+   +  +NF+ I N
Sbjct: 276 LAKVALMTISLWFMAWTPYLVINFSGIFN 304


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 762 LFRIXLFIISKWTMSIIKFRNLNFNSIKN 676
           L ++ L  IS W M+   +  +NF+ I N
Sbjct: 26  LAKVALMTISLWFMAWTPYLVINFSGIFN 54


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = -1

Query: 108 ITRKLSRFSKKKQATSCI 55
           ++RKL++F+K+K+A   +
Sbjct: 320 LSRKLAKFAKEKKAAKTL 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,178
Number of Sequences: 438
Number of extensions: 4171
Number of successful extensions: 38
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)