Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_N23
(999 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.4
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.4
07_03_1136 + 24218601-24218734,24218769-24219906 30 3.3
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 29 4.4
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.4
02_04_0382 - 22501041-22501279,22501717-22501810 29 4.4
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 29 4.4
01_05_0490 + 22672241-22674679 29 4.4
07_01_0080 + 587674-588510 24 7.0
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 29 7.7
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 25 8.5
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +2
Query: 728 LPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXPXXAXXXGXSXFP 907
+PPPP G G F PPPP P + P G P P + P
Sbjct: 650 VPPPPAPGIGN---KFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGP 706
Query: 908 SPP 916
P
Sbjct: 707 GVP 709
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP N L PPPPPP
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPP 608
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXPRXXXGXVXLPLPPXXXXXG 933
PPPPPP P G G P P G +P PP G
Sbjct: 1110 PPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLG 1158
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXPRXXXGXVXLPLPP 915
PP PPP GG P P PR G P PP
Sbjct: 1160 PPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPP 1202
Score = 30.3 bits (65), Expect = 2.5
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +2
Query: 731 PPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXPXXAXXXGXSXFPS 910
PPPP GG G P PP P P G G P P A G + P+
Sbjct: 1123 PPPPIGGLGGHQ-----APPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPN 1177
Score = 28.7 bits (61), Expect = 7.7
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Frame = +2
Query: 725 PLPPPPXGGXGXFX--FXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXP----XXAXX 886
P PPPP G G PPPP P PG P+ P
Sbjct: 1161 PAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPP 1220
Query: 887 XGXSXFPSPP 916
G P+PP
Sbjct: 1221 PGGRGLPAPP 1230
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Frame = -1
Query: 915 GGEGKXDXPXXXAXXGXRGXXPPPGXXXXXGXXVXXVGXGGGG-----XXXXXKXKXXPX 751
GG G P A G P PG G +G GGGG +
Sbjct: 113 GGGGPPSLPPG-AGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGR 171
Query: 750 PPXGGGGRG 724
PP GGGG G
Sbjct: 172 PPGGGGGGG 180
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 914 GGRGXXTXPXXXRGXGXGXPXPPPXXXXXXGXXXXXWGGGGGG 786
GGRG G G G P P G GGGGGG
Sbjct: 163 GGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGG 205
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/64 (28%), Positives = 21/64 (32%)
Frame = -1
Query: 915 GGEGKXDXPXXXAXXGXRGXXPPPGXXXXXGXXVXXVGXGGGGXXXXXKXKXXPXPPXGG 736
GG+G+ D G G V G G + P PP GG
Sbjct: 34 GGQGRGDLGVVGERQGGGRGAGERGGRHDAPRGRGGVAVGAGAGRQQQQPFHAPAPPSGG 93
Query: 735 GGRG 724
GGRG
Sbjct: 94 GGRG 97
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXPR 879
PPPPPP P G G P P P+
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPK 383
Score = 28.7 bits (61), Expect = 7.7
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +3
Query: 336 PXPPLXPXXKXXXXXXXXXXXXXXAXPPPXKKKXKXFXXGGAPPPPP 476
P PP P K A PPP K PPPPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 790 PPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
PPP P P GGG G P P P
Sbjct: 74 PPPSPDYYDPPPSPYYGGGGGYGKPPPPP 102
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +2
Query: 710 KKKXXPLPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXP 871
+K+ P PPPP F PP P P T P P PL P
Sbjct: 961 EKRPPPPPPPPNVAPPPFTRQDIPPPPPSPPPLPITQPPSVPPPP-NSPPPLQP 1013
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +3
Query: 789 PPPPXPXXXXXXXXXXXXRGGGXXXXXXXXXAXGGRLXSPPPPXTXSWXKXXXXXFXPXP 968
PPPP P +GG + PPPP T K P P
Sbjct: 607 PPPPPPPPPSSIFYNLFKKGGSKSRRIHSVAPP--QPPPPPPPTTRRSRKPPQPPSRPAP 664
Query: 969 PAPXP 983
P P P
Sbjct: 665 PPPPP 669
>07_01_0080 + 587674-588510
Length = 278
Score = 24.2 bits (50), Expect(2) = 7.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 729 SPPPRXGGXXXFXFXXXXXXPPPPXP 806
S PPR GG F PPPP P
Sbjct: 77 STPPRLGGDGMF---RRPPPPPPPPP 99
Score = 23.0 bits (47), Expect(2) = 7.0
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 906 PPPPXTXSWXKXXXXXFXPXPPAPXP 983
PPPP S P PP P P
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPP 119
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 788 PPPPXPTXXTXXPXXXXXPGGG 853
PPPP PT T P P GG
Sbjct: 85 PPPPPPTNGTLTPPPSSAPSGG 106
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 25.4 bits (53), Expect(2) = 8.5
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 906 PPPPXTXSWXKXXXXXFXPXPPAPXPXHA 992
PPPP K P PPAP H+
Sbjct: 153 PPPPPDHVLKKVPSHPSPPPPPAPLNVHS 181
Score = 21.4 bits (43), Expect(2) = 8.5
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = +3
Query: 726 PSPPPRXGGXXXFXFXXXXXXPPPPXP 806
P PPP G + PPP P
Sbjct: 131 PPPPPFKGDHYGGVYQNWQQNGPPPPP 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,606,172
Number of Sequences: 37544
Number of extensions: 498407
Number of successful extensions: 6953
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5982
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2928685000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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