Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_N23
         (999 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.38 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.38
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +1

Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
           PPPPPP      P      GG  G   P P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 23.8 bits (49), Expect = 8.2
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXP 864
           PPP PP      P      GG  G P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGP 606


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 18/60 (30%), Positives = 20/60 (33%)
 Frame = -1

Query: 903 KXDXPXXXAXXGXRGXXPPPGXXXXXGXXVXXVGXGGGGXXXXXKXKXXPXPPXGGGGRG 724
           K D P   A  G  G   P G     G      G GGGG     + +       G GG G
Sbjct: 196 KEDEPG--AGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,512
Number of Sequences: 2352
Number of extensions: 6614
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 109763433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)