Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_N23
(999 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.97
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.97
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.97
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 27 1.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 27 1.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 3.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 3.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 26 5.4
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 6.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 6.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 9.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 9.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 9.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 9.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
PPPPPP P GG G P P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXPXXAXXXGXSXF 904
P PPPP GG PP P P PGG P P G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG--CPPPPPPPPPGGFKGG 783
Query: 905 PSPP 916
P PP
Sbjct: 784 PPPP 787
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
PPPPPP P G G P P P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 24.2 bits (50), Expect(2) = 9.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 452 GGXPPPPPXXG 484
GG PPPPP G
Sbjct: 740 GGPPPPPPPGG 750
Score = 22.2 bits (45), Expect(2) = 9.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 461 PPPPPXXGG 487
PPPPP GG
Sbjct: 771 PPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
PPPPPP P GG G P P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXPXXAXXXGXSXF 904
P PPPP GG PP P P PGG P P G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG--CPPPPPPPPPGGFKGG 783
Query: 905 PSPP 916
P PP
Sbjct: 784 PPPP 787
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPP 748
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
PPPPPP P G G P P P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 24.2 bits (50), Expect(2) = 9.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 452 GGXPPPPPXXG 484
GG PPPPP G
Sbjct: 740 GGPPPPPPPGG 750
Score = 22.2 bits (45), Expect(2) = 9.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 461 PPPPPXXGG 487
PPPPP GG
Sbjct: 771 PPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
PPPPPP P GG G P P P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXPXXAXXXGXSXF 904
P PPPP GG PP P P PGG P P G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG--CPPPPPPPPPGGFKGG 366
Query: 905 PSPP 916
P PP
Sbjct: 367 PPPP 370
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPP 331
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPP 347
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 787 PPPPPPHXXXXXPXXXXXXGGGXGXPXPXP 876
PPPPPP P G G P P P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 24.2 bits (50), Expect(2) = 9.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 452 GGXPPPPPXXG 484
GG PPPPP G
Sbjct: 323 GGPPPPPPPGG 333
Score = 22.2 bits (45), Expect(2) = 9.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 461 PPPPPXXGG 487
PPPPP GG
Sbjct: 354 PPPPPPPGG 362
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPP 474
P PP L GG PPPPP
Sbjct: 773 PPPPSAIPLPPRLQGGIPPPPP 794
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 451 GGXPPPPPP 477
G PPPPPP
Sbjct: 796 GIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.5 bits (58), Expect(2) = 1.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPP 474
P PP L GG PPPPP
Sbjct: 773 PPPPSAIPLPPRLQGGIPPPPP 794
Score = 21.4 bits (43), Expect(2) = 1.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 451 GGXPPPPPP 477
G PPPPPP
Sbjct: 796 GIIPPPPPP 804
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 875 GXGXGXPXPPPXXXXXXGXXXXXWGGGGGG 786
G G P PPP G GGGGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGG 78
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 914 GGRGXXTXPXXXRGXGXGXPXPPPXXXXXXGXXXXXWGGGGGG 786
GG G G G P PPP G GGG GG
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGG 135
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXP 805
P+P PP GG G F PPPP P
Sbjct: 660 PMPVPPPGGLGGF---MPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXP 805
P+P PP GG G F PPPP P
Sbjct: 660 PMPVPPPGGLGGF---MPPPPPPPPMP 683
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +2
Query: 728 LPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXPXXAXXXGXSXFP 907
+PPPP G + PPPP P + P P P P G P
Sbjct: 333 MPPPPPPG-----MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP-----SGHGMIP 382
Query: 908 SPP 916
PP
Sbjct: 383 PPP 385
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 337 PXPPXXXFXXRXXXXXXXXXXXXXPXPPXXKKXKNXLXGGXPPPPPP 477
P PP R P PP + G PPPPPP
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + GG PPPPPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +2
Query: 728 LPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXPGGGXXPLXPXXAXXXGXSXFP 907
+PPPP G + PPPP P + P P P P G P
Sbjct: 343 MPPPPPPG-----MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP-----SGHGMIP 392
Query: 908 SPP 916
PP
Sbjct: 393 PPP 395
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 337 PXPPXXXFXXRXXXXXXXXXXXXXPXPPXXKKXKNXLXGGXPPPPPP 477
P PP R P PP + G PPPPPP
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.8 bits (54), Expect(2) = 5.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP + L PPPPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPP 1362
Score = 21.4 bits (43), Expect(2) = 5.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 460 PPPPPPXXXXE 492
PPPPPP E
Sbjct: 1390 PPPPPPLPSEE 1400
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 796 PPPHXXXXXPXXXXXXGGGXGXPXPXPRXXXGXVXLPLPP 915
PPP P GGG G P P P G P PP
Sbjct: 28 PPPQCCGPPPACGNPCGGGFG-PPPPPFGPVGYALPPPPP 66
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 864 RGXXPPPGXXXXXGXXVXXVGXGGGGXXXXXKXKXXPXPPXGGGGR 727
RG P G G G GG P PP GGGGR
Sbjct: 178 RGLPPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGR 223
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 408 AXPPPXKKKXKXFXXGGAPPPPP 476
A PPP K G +PPPPP
Sbjct: 120 ASPPPPPPPRKSRAGGSSPPPPP 142
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXP 844
P PPPP GG PPPP P P P
Sbjct: 216 PAPPPPIGGIA--PVNAHGAPPPPPLPPVGAGAPPPPPPP 253
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP K L G PPPPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPP 259
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP K L G PPPPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPP 280
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP K L G PPPPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPP 265
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXP 844
P PPPP GG PPPP P P P
Sbjct: 202 PAPPPPIGGIA--PVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 725 PLPPPPXGGXGXFXFXFXXXXPPPPXPTXXTXXPXXXXXP 844
P PPPP GG PPPP P P P
Sbjct: 202 PAPPPPIGGIA--PVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 409 PXPPXXKKXKNXLXGGXPPPPPP 477
P PP +N L G PPPPPP
Sbjct: 561 PPPPPPPLPQN-LSGAPPPPPPP 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,462,632
Number of Sequences: 27780
Number of extensions: 225545
Number of successful extensions: 2583
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2000
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2615559500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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