Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_N22
         (898 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.6  
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         29   8.6  
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    29   8.6  
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    29   8.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.6  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   8.6  

>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 300 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 395
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/62 (30%), Positives = 22/62 (35%)
 Frame = +3

Query: 624 PPGSSLVRSPCFRPXPLTGYLSAFLPSGSVALSHSSRC*VSQFGVGRFAPSWAVCTNPPF 803
           PP  SLVR+      P  GY      +G     +SS C    FG      S      PP 
Sbjct: 188 PPSKSLVRNQHLNLYPTQGYGDGTPSAGGGGPGNSSTCSSLFFGSSSACGSTTALIEPPV 247

Query: 804 SP 809
            P
Sbjct: 248 YP 249


>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
           EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/62 (30%), Positives = 22/62 (35%)
 Frame = +3

Query: 624 PPGSSLVRSPCFRPXPLTGYLSAFLPSGSVALSHSSRC*VSQFGVGRFAPSWAVCTNPPF 803
           PP  SLVR+      P  GY      +G     +SS C    FG      S      PP 
Sbjct: 641 PPSKSLVRNQHLNLYPTQGYGDGTPSAGGGGPGNSSTCSSLFFGSSSACGSTTALIEPPV 700

Query: 804 SP 809
            P
Sbjct: 701 YP 702


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
           protein.
          Length = 3433

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/62 (30%), Positives = 22/62 (35%)
 Frame = +3

Query: 624 PPGSSLVRSPCFRPXPLTGYLSAFLPSGSVALSHSSRC*VSQFGVGRFAPSWAVCTNPPF 803
           PP  SLVR+      P  GY      +G     +SS C    FG      S      PP 
Sbjct: 652 PPSKSLVRNQHLNLYPTQGYGDGTPSAGGGGPGNSSTCSSLFFGSSSACGSTTALIEPPV 711

Query: 804 SP 809
            P
Sbjct: 712 YP 713


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 300 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 395
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
 Frame = +1

Query: 454  TQERTCEQKASKRPGTVKRPRCWRFSIGS-APLTSITKIDAQVRGGETRQDYKDTRRFPL 630
            + + +C+   +++P T  +P C+  S  S  P T  T    +   G T  D +     P 
Sbjct: 776  SSDPSCQPPTTRKPITTPKPNCYPGSTDSRCPQTPRTTQQPRCYPGSTDPDCQPATYLPP 835

Query: 631  EAPSCALPVSDPXRLPDTCPPF 696
                  +  + P   P +  P+
Sbjct: 836  TTARTTITTAKPRCYPGSSDPY 857


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,147,140
Number of Sequences: 53049
Number of extensions: 845224
Number of successful extensions: 2030
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2030
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)