Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_N21
         (950 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   7.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 689 GGXXXXPPPPPP 724
           GG    PPPPPP
Sbjct: 525 GGPLGPPPPPPP 536


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 686 GGGXXXXPPPPPPXS 730
           G G    PPPPPP S
Sbjct: 779 GIGSPPPPPPPPPSS 793


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 86   YARRGTXFPEIKILKRDFPI 27
            Y RR    PEIK+L   FP+
Sbjct: 1814 YKRRYAMRPEIKVLANIFPV 1833


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,263
Number of Sequences: 2352
Number of extensions: 5800
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104189652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)