Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_N16
         (802 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           32   0.61 
09_04_0506 - 18188785-18190599                                         31   0.81 
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.7  
01_03_0005 + 11568545-11569119,11569179-11569191                       25   7.2  
12_01_0252 + 1868670-1869200,1870167-1871120                           28   7.5  
11_01_0252 + 1934505-1935032,1936001-1936957                           28   9.9  

>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 16/55 (29%), Positives = 16/55 (29%)
 Frame = +1

Query: 574 GGXXXXGXXPXEXGPPPPXXKKXKKXXXXFXXKXXPXXFPXPPPGGXXXXXGXPP 738
           GG       P   GPPPP                 P   P PP  G     G PP
Sbjct: 268 GGGQVPAAPPPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPP 322



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = -1

Query: 577 PPXXXXPPPPXGGXXXXXGGGGFFKXXXGGPKXXGXXXX*KXPG 446
           PP     PPP  G     GGG       GGP+  G     K PG
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPFKKSPG 406


>09_04_0506 - 18188785-18190599
          Length = 604

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
 Frame = -1

Query: 577 PPXXXXPPPPXGGXXXXXGGGGFFK----XXXGGPKXXGXXXX*KXPGGENFF 431
           PP    PPPP        GG GF +       GGP   G       PGG   F
Sbjct: 136 PPVAAAPPPPPHNQIQPGGGDGFHRQGGGNYGGGPIVVGNGGGGDGPGGTTLF 188


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/46 (34%), Positives = 16/46 (34%)
 Frame = +1

Query: 601 PXEXGPPPPXXKKXKKXXXXFXXKXXPXXFPXPPPGGXXXXXGXPP 738
           P   GPPPP   K             P   P PPPGG       PP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPP---PPPPPGGKKGGPPPPP 381


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 25.4 bits (53), Expect(2) = 7.2
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +3

Query: 540 PPXGGGGXXXXGGXXXXXXXXXXXXPPPP 626
           PP GGGG    G             PPPP
Sbjct: 115 PPTGGGGGGGGGWQQGGGGGGAYPTPPPP 143



 Score = 21.4 bits (43), Expect(2) = 7.2
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 489 PPXXXLKNPPPPXKXXXPPXGGGG 560
           PP      P  P     P  GGGG
Sbjct: 59  PPPVVTPTPQCPPPPSYPSGGGGG 82


>12_01_0252 + 1868670-1869200,1870167-1871120
          Length = 494

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 513 PPPPXKXXXPPXGGGGXXXXGG 578
           PPPP     P  GGGG    GG
Sbjct: 65  PPPPPPLNWPTAGGGGGGSGGG 86


>11_01_0252 + 1934505-1935032,1936001-1936957
          Length = 494

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 513 PPPPXKXXXPPXGGGGXXXXGG 578
           PPPP     P  GGGG    GG
Sbjct: 64  PPPPPPLNWPMAGGGGGGSGGG 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,566,141
Number of Sequences: 37544
Number of extensions: 443498
Number of successful extensions: 1290
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)