Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_N15
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 188 4e-48
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 93 2e-19
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 85 8e-17
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 53 2e-07
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 49 5e-06
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta... 40 0.002
Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 31 0.81
Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical pr... 31 1.4
U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical pr... 29 3.3
U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 29 4.3
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 28 9.9
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 188 bits (458), Expect = 4e-48
Identities = 86/190 (45%), Positives = 124/190 (65%)
Frame = +3
Query: 180 FENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHY 359
F N RN + + G APK T TGTTIV + + G+++GAD+RAT +++DK+C+K+H
Sbjct: 23 FSNCIRNQAMCKMGGKAPKLTSTGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHK 82
Query: 360 LASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGA 539
L ++Y CGAGTAAD + T+ ++ L L L+TGR V TA K+ LF YQG+IGA
Sbjct: 83 LTESIYACGAGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGA 142
Query: 540 ALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVR 719
L++GGVD TGPH+Y +G+ P+ GSGS AA+ + E +K DM ++E +KLV+
Sbjct: 143 YLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQ 202
Query: 720 DAIAAGIFND 749
A+ AG+ D
Sbjct: 203 RALEAGMHGD 212
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 93.5 bits (222), Expect = 2e-19
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Frame = +3
Query: 219 GFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTA 398
GF + TGTT++ + Y GV++G D+R + + ++ + KI + NM C +G+A
Sbjct: 13 GFYPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSA 72
Query: 399 ADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVD-RTGP 575
ADT+ +++ + + V + ++ + ++ L+ Y+ + A++++ G D G
Sbjct: 73 ADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDEELGG 132
Query: 576 HIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAAGIFND 749
+Y I G V + GSGS ++ W+ ++ EE K +V+ A+ F D
Sbjct: 133 QVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRD 190
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 84.6 bits (200), Expect = 8e-17
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Frame = +3
Query: 243 KTGTTIVGIIY-----AD--GVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAA 401
+ GTT + +Y AD G+I+ D+RA+ +S K+ KI + M AG AA
Sbjct: 62 RKGTTTLAFVYEPATPADKGGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAA 121
Query: 402 DTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH-IGAALVLGGVDRTGPH 578
D + T+ VA L L ++ V A+ L+ Y+G + ++ G D+ GP
Sbjct: 122 DCQFWTRIVAKYCTLYELREKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGYDKKGPQ 181
Query: 579 IYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAAGIFNDLG 755
I+ + G +L ++GSGSL A + + +K M ++E +KL AI + D G
Sbjct: 182 IFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHATYRDSG 240
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Frame = +3
Query: 246 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQS 425
TG T+V + + V + +D R E + +K+H + +Y AG +D +
Sbjct: 7 TGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEK 66
Query: 426 VASQLELQRLHTGRTVPVETAATLLKRMLF--RYQGHIGAALVLGGVDRTGPHIYCIYPH 599
+ + L L R + + + ++ + + R+ + LV G D P+I C+
Sbjct: 67 IMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTI 126
Query: 600 GSVD-KLPYATMGSGSLAAMAVFEAGWKRDMNEEE 701
G V + +G+G + V E W+ +M +E
Sbjct: 127 GCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDE 161
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 48.8 bits (111), Expect = 5e-06
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Frame = +3
Query: 171 DSRFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQK 350
DSR F L Q + + GT + GI+ ++G+++ A+ + + +K
Sbjct: 6 DSRTTIFSPEGRLYQVEYAMEAISHAGTCL-GILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 351 IHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY--- 521
++ L+ N+ C AG AD + + R G +PVE L RY
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQI 124
Query: 522 --QGHIGAALVLGGVDR-TGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMN 692
+ G +L+ G D+ G +Y P G+ +GS AA+ + + +K N
Sbjct: 125 GGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYK-SPN 183
Query: 693 EEEGKKL 713
EE K+L
Sbjct: 184 LEEAKQL 190
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 46.8 bits (106), Expect = 2e-05
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Frame = +3
Query: 228 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 407
A +A K G+T +GI ++GV+L A+ R+T +V+D +KI + ++ AG AD+
Sbjct: 27 AIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDA-IEKISKVDQHIGVTFAGLIADS 85
Query: 408 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY---------QGHIGAALVLGGV 560
+ + + R + VE + + ++ G A++ GV
Sbjct: 86 RTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGV 145
Query: 561 DRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKL 713
D+ G ++ + P G+ ++G+ S A + + + +EG K+
Sbjct: 146 DQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKM 196
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Frame = +3
Query: 228 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 407
A +A K G+T VG+ D +++G + ++ + D+ +KIH + ++ AG +AD
Sbjct: 23 AQEAVKKGSTAVGVRGKDCIVIGVEKKSIP-ALQDDRTIRKIHMIDDHVMLAFAGLSADA 81
Query: 408 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-----QGHIGAALVLGGVDRTG 572
+ + + +L V V + + R+ + G ++++GG D G
Sbjct: 82 RVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDG 141
Query: 573 -PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKL 713
P ++ P G+ + G G E + + +E L
Sbjct: 142 TPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTL 189
>U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta
subunit protein 4 protein.
Length = 202
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 7/164 (4%)
Frame = +3
Query: 258 IVGIIYADGVILGADTRA-TENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVAS 434
+VGI + VIL AD +++D K + L + G D
Sbjct: 7 LVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDWTKR 66
Query: 435 QLELQRLHTGRTVPVETAATLLKRML---FRYQGHIGAALVLGGVDRTGPHIYC---IYP 596
L+L + G V A ++R + R Q H +++GG D + Y
Sbjct: 67 NLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYL 126
Query: 597 HGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAI 728
+ + PY G A+ + +K+DM E EG L+ I
Sbjct: 127 ANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCI 170
>Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical
protein F39H11.5 protein.
Length = 236
Score = 35.1 bits (77), Expect = 0.065
Identities = 35/183 (19%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Frame = +3
Query: 240 TKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTT 419
T TGT+++ + Y GV++ D + + KN + + + N+ G AD
Sbjct: 14 TCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGGDHADFHWLQ 73
Query: 420 QSVASQLELQRLHTGRTVPVETAATLLKRMLFR--YQGHIGAALVLGGVDR--------T 569
+ Q+ L + P L + + + LV+ GV+ +
Sbjct: 74 NVIERQVLLWKRFDQDIGPKALHGYLTSLLYAKRCKMNPVWNTLVVAGVEEEEKNNKETS 133
Query: 570 GPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKR---DMNEEEGKKLVRDAIAAGI 740
P I I G ++ + G G+ E W++ D++ EE + ++R ++ +
Sbjct: 134 TPFIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSREEAEAVLRKSLELTL 193
Query: 741 FND 749
++D
Sbjct: 194 YHD 196
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 33.5 bits (73), Expect = 0.20
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Frame = +3
Query: 228 APKATKTGTTIVGIIYADGVILGADTRATEN--TVVSDKNCQKIHYLASNMYCCGAGTAA 401
A A K G VG+ DGV+L ATEN +V++D K+ ++ ++ C +G
Sbjct: 24 ALNAVKNGQPSVGLRAKDGVVL-----ATENVGSVLTDDQ-PKVEQISKHIGCVYSGMGP 77
Query: 402 DTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY--QGHI---GAALVLGGVDR 566
D + + + G +P T + ++ Y G + GA+L++ G D+
Sbjct: 78 DFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDK 137
Query: 567 T--GPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEG 704
P ++ P G+ +G + A E + + ++G
Sbjct: 138 NPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDG 185
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 355 WIFWQFLSETTVFSVALVSAPSITPSAYIIPTIVVPVLVALGAGNPF 215
WIF L + ++S P I A + P +VP++++ G G PF
Sbjct: 687 WIFVPVLVSPRILGAVILS-PVIMSPAILTPLCMVPIILSPGVGLPF 732
>Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical
protein F40G12.2 protein.
Length = 265
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 324 VVSDKNCQKIHYLASNMYCC 383
V S +NC+K+H+L+SN + C
Sbjct: 210 VKSQENCEKVHFLSSNFWNC 229
>U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical
protein ZC487.1b protein.
Length = 409
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = -1
Query: 809 ILGRASVTITHRSTLE----PEPQVIEYTSSNSISD-----KLFSFFLIHITFPTCF 666
ILG S THRS LE +P +EY S+N D + F +I FPT +
Sbjct: 180 ILGCISAIETHRSVLECIQNQQPYALEYLSANQTRDIFPGLESFCIQVIKSVFPTSY 236
>U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical
protein ZC487.1a protein.
Length = 411
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = -1
Query: 809 ILGRASVTITHRSTLE----PEPQVIEYTSSNSISD-----KLFSFFLIHITFPTCF 666
ILG S THRS LE +P +EY S+N D + F +I FPT +
Sbjct: 182 ILGCISAIETHRSVLECIQNQQPYALEYLSANQTRDIFPGLESFCIQVIKSVFPTSY 238
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 355 WIFWQFLSETTVFSVALVSAPSITPSAYIIPTIVVPVLVALGAGNPF 215
W+F L + A+V +P + + P +VPV+++ G G PF
Sbjct: 596 WVFVPVLVSPRILG-AVVLSPIVFSPVILSPLCLVPVILSPGVGLPF 641
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 117 ICQITKWHLH*CPKFQFQDSRFENFQRN 200
+ Q+T +H H C KF+ S+ + + +N
Sbjct: 10 VSQVTDFHFHTCRKFRLFSSKSDGYSQN 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,509,429
Number of Sequences: 27780
Number of extensions: 391086
Number of successful extensions: 1013
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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