Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_N14
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.006
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.006
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.27
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.27
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.27
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +2
Query: 224 PPGXXPXGXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKXXGG 403
PP P G P G P PP G PP PPP + G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 295
Query: 404 XGXPPTPPKXFXCVWXXPXP 463
PP PP+ P P
Sbjct: 296 SPPPPPPPRGSPPTGSLPPP 315
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 227 PGXXPXGXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKXXGGX 406
P P G P G P PP PP PPP G
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG-----SPPPAGT 326
Query: 407 GXPPTPPK 430
G PP PP+
Sbjct: 327 GSPPPPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +2
Query: 224 PPGXXPXGXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKXXGG 403
PP P G P G P PP G PP PPP + G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 316
Query: 404 XGXPPTPPKXFXCVWXXPXP 463
PP PP+ P P
Sbjct: 317 SPPPPPPPRGSPPTGSLPPP 336
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 227 PGXXPXGXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKXXGGX 406
P P G P G P PP PP PPP G
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG-----SPPPAGT 347
Query: 407 GXPPTPPK 430
G PP PP+
Sbjct: 348 GSPPPPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +2
Query: 224 PPGXXPXGXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKXXGG 403
PP P G P G P PP G PP PPP + G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR--AG 301
Query: 404 XGXPPTPPKXFXCVWXXPXP 463
PP PP+ P P
Sbjct: 302 SPPPPPPPRGSPPTGSLPPP 321
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 227 PGXXPXGXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKXXGGX 406
P P G P G P PP PP PPP G
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG-----SPPPAGT 332
Query: 407 GXPPTPPK 430
G PP PP+
Sbjct: 333 GSPPPPPR 340
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Frame = +2
Query: 224 PPGXXPX--GXPQXGXXGXXXXXTPGEKPXPPXXG---EXXPPXXXXPPPXXXXXXKXXK 388
PPG P G P G T G P PP G P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 389 KXXGGXGXPPTPP 427
G G PP PP
Sbjct: 776 PPGGFKGGPPPPP 788
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +2
Query: 224 PPGXXPX---GXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKX 394
PPG P G P G + G P PP G PP PPP K
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP----PPPPPPGGFK----- 781
Query: 395 XGGXGXPPTPPKXF 436
G PP PP F
Sbjct: 782 --GGPPPPPPPGMF 793
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/93 (25%), Positives = 24/93 (25%), Gaps = 2/93 (2%)
Frame = +1
Query: 292 GGKTXPPXXGGXXPPXXXXP--PXXXXXXXXXXKKXXGGXGXPPHXPQKXXXCXGXPXPX 465
G PP GG PP P G PP P G P P
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 466 PXXXXXXXFXXFXXXPPPSPPXXFXGXXXXXXP 564
P PPP PP F G P
Sbjct: 762 PPPPGGCP-----PPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Frame = +2
Query: 224 PPGXXPX--GXPQXGXXGXXXXXTPGEKPXPPXXG---EXXPPXXXXPPPXXXXXXKXXK 388
PPG P G P G T G P PP G P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 389 KXXGGXGXPPTPP 427
G G PP PP
Sbjct: 776 PPGGFKGGPPPPP 788
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +2
Query: 224 PPGXXPX---GXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKX 394
PPG P G P G + G P PP G PP PPP K
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP----PPPPPPGGFK----- 781
Query: 395 XGGXGXPPTPPKXF 436
G PP PP F
Sbjct: 782 --GGPPPPPPPGMF 793
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/93 (25%), Positives = 24/93 (25%), Gaps = 2/93 (2%)
Frame = +1
Query: 292 GGKTXPPXXGGXXPPXXXXP--PXXXXXXXXXXKKXXGGXGXPPHXPQKXXXCXGXPXPX 465
G PP GG PP P G PP P G P P
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Query: 466 PXXXXXXXFXXFXXXPPPSPPXXFXGXXXXXXP 564
P PPP PP F G P
Sbjct: 762 PPPPGGCP-----PPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Frame = +2
Query: 224 PPGXXPX--GXPQXGXXGXXXXXTPGEKPXPPXXG---EXXPPXXXXPPPXXXXXXKXXK 388
PPG P G P G T G P PP G P PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 389 KXXGGXGXPPTPP 427
G G PP PP
Sbjct: 359 PPGGFKGGPPPPP 371
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +2
Query: 224 PPGXXPX---GXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPPPXXXXXXKXXKKX 394
PPG P G P G + G P PP G PP PPP K
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP----PPPPPPGGFK----- 364
Query: 395 XGGXGXPPTPPKXF 436
G PP PP F
Sbjct: 365 --GGPPPPPPPGMF 376
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/93 (25%), Positives = 24/93 (25%), Gaps = 2/93 (2%)
Frame = +1
Query: 292 GGKTXPPXXGGXXPPXXXXP--PXXXXXXXXXXKKXXGGXGXPPHXPQKXXXCXGXPXPX 465
G PP GG PP P G PP P G P P
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Query: 466 PXXXXXXXFXXFXXXPPPSPPXXFXGXXXXXXP 564
P PPP PP F G P
Sbjct: 345 PPPPGGCP-----PPPPPPPPGGFKGGPPPPPP 372
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 224 PPGXXPXGXPQXGXXGXXXXXTPGEKPXPPXXGEXXPPXXXXPP 355
P G P P PG P PP G PP PP
Sbjct: 691 PAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPP 734
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,336,203
Number of Sequences: 27780
Number of extensions: 132609
Number of successful extensions: 364
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 256
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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