Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_N07
         (955 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15; Coeloma...   157   4e-37
UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19; Eumetazo...   146   7e-34
UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4; Magnoli...    59   2e-07
UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole gen...    56   1e-06
UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1; ...    48   4e-04
UniRef50_UPI00006CB667 Cluster: hypothetical protein TTHERM_0044...    44   0.008
UniRef50_Q553E6 Cluster: Putative uncharacterized protein; n=2; ...    39   0.16 

>UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15;
           Coelomata|Rep: UPF0139 protein C19orf56 - Homo sapiens
           (Human)
          Length = 106

 Score =  157 bits (381), Expect = 4e-37
 Identities = 70/90 (77%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
 Frame = +1

Query: 274 RYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSRVSDD 450
           RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW AV+CS ISFANSR S+D
Sbjct: 17  RYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFISFANSRSSED 76

Query: 451 TKQIVSSFMLSISAVVMSYLQNPAPMTPPW 540
           TKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 77  TKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106


>UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19;
           Eumetazoa|Rep: UPF0139 protein CG10674 - Drosophila
           melanogaster (Fruit fly)
          Length = 108

 Score =  146 bits (354), Expect = 7e-34
 Identities = 66/94 (70%), Positives = 77/94 (81%), Gaps = 3/94 (3%)
 Frame = +1

Query: 274 RYKPPP---PTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSRVS 444
           RYK P     +    ED+  DYMNILGM+FSMCGLMM+LKWCAW A++CS ISFA+SR S
Sbjct: 15  RYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFALYCSCISFASSRAS 74

Query: 445 DDTKQIVSSFMLSISAVVMSYLQNPAPMTPPWAA 546
           DD KQ++SSFMLS+SAVVMSYLQNPA MTPPWA+
Sbjct: 75  DDAKQVLSSFMLSVSAVVMSYLQNPAAMTPPWAS 108


>UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4;
           Magnoliophyta|Rep: UPF0139 protein At5g07960 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 107

 Score = 58.8 bits (136), Expect = 2e-07
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +1

Query: 280 KPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSR-VSDDTK 456
           KP  P     EDL  DY   + ++  + G+M R K C+W A+   + S AN R + +D K
Sbjct: 21  KPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQSLANMRNLENDLK 80

Query: 457 QIVSSFMLSISAVVMSYLQNPAPMT 531
           QI  + M +I  +V +YL    P T
Sbjct: 81  QISMAMMFAIMGLVTNYLGPNRPAT 105


>UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
           chr17 scaffold_12, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 109

 Score = 56.0 bits (129), Expect = 1e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
 Frame = +1

Query: 256 ALTEKRRYKPPPPTSAPA---EDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 426
           A+ + R+     P  AP    EDL  DY   + ++F++ GLM R K C+W A+   + S 
Sbjct: 10  AVNDPRQPSTANPYVAPMVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69

Query: 427 ANSR-VSDDTKQIVSSFMLSISAVVMSYL 510
           +N R   +D KQI  + M +I  ++ +YL
Sbjct: 70  SNMRNFENDLKQISMAMMFAIMGLMTNYL 98


>UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 116

 Score = 48.0 bits (109), Expect = 4e-04
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +1

Query: 256 ALTEKRRYKPPPPTSAPA---EDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 426
           A+ + R+     P  AP    EDL  DY   + ++F++ GLM R K C+W A+   + S 
Sbjct: 10  AVNDPRQPSTANPYVAPMVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69

Query: 427 ANSR-VSDDTKQI 462
           +N R   +D KQI
Sbjct: 70  SNMRNFENDLKQI 82


>UniRef50_UPI00006CB667 Cluster: hypothetical protein
           TTHERM_00446120; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00446120 - Tetrahymena
           thermophila SB210
          Length = 121

 Score = 43.6 bits (98), Expect = 0.008
 Identities = 23/81 (28%), Positives = 39/81 (48%)
 Frame = +1

Query: 277 YKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSRVSDDTK 456
           Y+P P T    +    D   IL  +    G+MM++  C W A+F    +FAN + + D K
Sbjct: 15  YQPAPQTE---DQQGGDLQQILSFILGFVGIMMKI--CLWVALFMLLSNFANIKQTSDVK 69

Query: 457 QIVSSFMLSISAVVMSYLQNP 519
           Q++ +  + +  +V  Y   P
Sbjct: 70  QMIINAGIIVMGMVSLYYWQP 90


>UniRef50_Q553E6 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 98

 Score = 39.1 bits (87), Expect = 0.16
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 334 NILGMVFSMCGLMMRLKWCAWTAVFCSSISFANSRVSDDT-KQIVSSFMLSISAVVMSY 507
           ++  ++F   G+M++ K C W +  C     +N +  D + + I+S   LS+  +VM+Y
Sbjct: 31  SLFSIIFGFLGIMLKYKICLWVSAVCCVAYLSNLKSKDSSVRTILSPVSLSLMGLVMAY 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,752,506
Number of Sequences: 1657284
Number of extensions: 8777871
Number of successful extensions: 26275
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26233
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)