Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_N06
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.8  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   3.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   3.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 281 VILRDIQNIFSHNVTALENNAPESPHL 201
           +++RD     +  +   E   P SPHL
Sbjct: 94  ILIRDFSKFANRGLGVFERTEPLSPHL 120


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -1

Query: 339 YSQCGFTNASRTHNHQFVLGHLARYTKYFF 250
           YSQC   NA  T+ H+           Y+F
Sbjct: 186 YSQCVTFNAFPTYTHEITYSLFGMIMMYWF 215


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 151 SSVIKHRPRQPCRCE*YKCGD 213
           + V++ + R+P  C+  KCGD
Sbjct: 122 NGVMEIKIREPVECKCIKCGD 142


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 151 SSVIKHRPRQPCRCE*YKCGD 213
           + V++ + R+P  C+  KCGD
Sbjct: 122 NGVMEIKIREPVECKCIKCGD 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,731
Number of Sequences: 438
Number of extensions: 2448
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)