Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_N02
         (1094 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro...    30   6.4  
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro...    30   6.4  
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro...    30   6.4  

>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
           protein.
          Length = 1058

 Score = 29.9 bits (64), Expect = 6.4
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 478 PPPPXPXGGFXXKKXXXRXXPXXXXXXXXGXXPPPPP 588
           PPPP P   F          P        G  PPPPP
Sbjct: 488 PPPPPPLPAFVAPPPPPPPPPPPPPLANYGAPPPPPP 524


>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
           protein.
          Length = 1153

 Score = 29.9 bits (64), Expect = 6.4
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 478 PPPPXPXGGFXXKKXXXRXXPXXXXXXXXGXXPPPPP 588
           PPPP P   F          P        G  PPPPP
Sbjct: 583 PPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPPP 619


>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
           protein.
          Length = 1286

 Score = 29.9 bits (64), Expect = 6.4
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 478 PPPPXPXGGFXXKKXXXRXXPXXXXXXXXGXXPPPPP 588
           PPPP P   F          P        G  PPPPP
Sbjct: 716 PPPPPPLPAFVAPPPPPPPPPPPPPMANYGAPPPPPP 752


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,174,830
Number of Sequences: 53049
Number of extensions: 614665
Number of successful extensions: 339
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5678470812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)