Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M21
         (894 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    93   8e-21
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.3  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 93.5 bits (222), Expect = 8e-21
 Identities = 45/106 (42%), Positives = 61/106 (57%)
 Frame = +1

Query: 397 EMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIRRY 576
           + GS +  + +KFQ+N+DVQ FSP+EI+                 QD HGYVSR F+RRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 577 ALPQGLFTRPRLESKLSSDGVLTVTAPKVLALPSTGXKIVPITHTG 714
            LP+G      + S LSSDG+LT+T P+         + +PITHTG
Sbjct: 63  MLPKG-HNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTG 107


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 547 YVSRQFIRRYALPQGLFTRPRLESKLSSDGVLTVTAPKVLALPSTGXKI-VPITHTGSC 720
           Y+S +F     +PQG    P L S   +D V  V  P    L +   KI +P++ +  C
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFIND-VCNVLPPDGHLLYADDIKIFLPVSSSSDC 718


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,722
Number of Sequences: 2352
Number of extensions: 13934
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)