Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M20
         (905 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051707-1|AAK93131.1|  482|Drosophila melanogaster LD24662p pro...    84   2e-16
AE014298-1742|AAF48133.1|  482|Drosophila melanogaster CG1796-PA...    84   2e-16
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros...    29   8.8  

>AY051707-1|AAK93131.1|  482|Drosophila melanogaster LD24662p
           protein.
          Length = 482

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 40/95 (42%), Positives = 58/95 (61%)
 Frame = +2

Query: 236 EDVIKHSVHTLVFRSLKRSHDMFLANQGMLPPIDDKAEKVLKLVKARDSYGQVMGAVRKA 415
           EDV KHSVHTL+FRSLKR+HD+F++NQG LP ID++ EK+ + +KA+D YG V+  V K 
Sbjct: 4   EDVQKHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKI 63

Query: 416 QALKQQESVTCRPETPLTTAETVETAPLPSEGAVV 520
              ++        +  L   +   T      G++V
Sbjct: 64  GEARKASGAQTPGDKTLAITDGSATDAASGAGSLV 98



 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 695 NEWFASGAADXVRKYGDXASGKLKVSLT 778
           NEWFA+GA D V K  D ASGKLK+SLT
Sbjct: 184 NEWFATGAGDRVIKIWDLASGKLKLSLT 211



 Score = 32.7 bits (71), Expect = 0.71
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 652 GHLGWXRCVAVEP 690
           GHLGW RC+AVEP
Sbjct: 170 GHLGWVRCIAVEP 182


>AE014298-1742|AAF48133.1|  482|Drosophila melanogaster CG1796-PA
           protein.
          Length = 482

 Score = 84.2 bits (199), Expect = 2e-16
 Identities = 40/95 (42%), Positives = 58/95 (61%)
 Frame = +2

Query: 236 EDVIKHSVHTLVFRSLKRSHDMFLANQGMLPPIDDKAEKVLKLVKARDSYGQVMGAVRKA 415
           EDV KHSVHTL+FRSLKR+HD+F++NQG LP ID++ EK+ + +KA+D YG V+  V K 
Sbjct: 4   EDVQKHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKI 63

Query: 416 QALKQQESVTCRPETPLTTAETVETAPLPSEGAVV 520
              ++        +  L   +   T      G++V
Sbjct: 64  GEARKASGAQTPGDKTLAITDGSATDAASGAGSLV 98



 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +2

Query: 695 NEWFASGAADXVRKYGDXASGKLKVSLT 778
           NEWFA+GA D V K  D ASGKLK+SLT
Sbjct: 184 NEWFATGAGDRVIKIWDLASGKLKLSLT 211



 Score = 32.7 bits (71), Expect = 0.71
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 652 GHLGWXRCVAVEP 690
           GHLGW RC+AVEP
Sbjct: 170 GHLGWVRCIAVEP 182


>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
            Drosophila melanogasterDNA for type II retrotransposable
            element  R2Dm.  ).
          Length = 1057

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = -2

Query: 469  GQWSFRSTGDRLLLFQGLSLPHCTHDLSV-----TISCFNQFQYFLCFIVDW 329
            G WS +S   + L+ +GL   + +H +SV     ++ CF QF Y   F  DW
Sbjct: 1007 GIWSGQSV--KRLIAKGLLSKYDSHIISVQVMRGSLGCFKQFMYLSGFSRDW 1056


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,238,586
Number of Sequences: 53049
Number of extensions: 642330
Number of successful extensions: 1590
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)