Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_M20
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 33 0.37
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z73098-1|CAA97330.2| 269|Caenorhabditis elegans Hypothetical pr... 28 8.0
U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 KHSVHTLVFRSLKRSHDMFLANQGMLPPIDDKAEKVLKLVKARDSYGQVMGAVRKAQALK 427
K ++ VF+SLKR+ D+F + PP+ ++ + +++ +K + YG V+ V + + +
Sbjct: 29 KKALLNQVFKSLKRAQDLFYHDYAQPPPMPEENDSLIRSMKRKHEYGNVIKKVEEMKVRR 88
Query: 428 QQESVTCRPETPL-TTAETVETAPLP 502
+ E + P+ T + +A P
Sbjct: 89 ENEMLALPTSQPMHGTGSVIASAGTP 114
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +2
Query: 695 NEWFASGAADXVRKYGDXASGKLKVSLTWTCEFSKRSGSVTKTSIFIXPAVXDRQ 859
N+WFASG AD + K D ASG+LK+SLT S R+ V+ F+ D+Q
Sbjct: 196 NQWFASGGADRIIKIWDLASGQLKLSLTGHIS-SVRAVKVSPRHPFLFSGGEDKQ 249
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 248 KHSVHTLVFRSLKRSHDMFLANQGMLPPIDDKAEKVLKLVKARDSYGQVMGAVRKAQALK 427
K ++ VF+SLKR+ D+F + PP+ ++ + +++ +K + YG V+ V + + +
Sbjct: 29 KKALLNQVFKSLKRAQDLFYHDYAQPPPMPEENDSLIRSMKRKHEYGNVIKKVEEMKVRR 88
Query: 428 QQESVTCRPETPL-TTAETVETAPLP 502
+ E + P+ T + +A P
Sbjct: 89 ENEMLALPTSQPMHGTGSVIASAGTP 114
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +2
Query: 695 NEWFASGAADXVRKYGDXASGKLKVSLTWTCEFSKRSGSVTKTSIFIXPAVXDRQ 859
N+WFASG AD + K D ASG+LK+SLT S R+ V+ F+ D+Q
Sbjct: 196 NQWFASGGADRIIKIWDLASGQLKLSLTGHIS-SVRAVKVSPRHPFLFSGGEDKQ 249
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +2
Query: 188 VFFK*F*TLINNFIMSEDVIKHSVHTLVFRSLKRSHDMFLANQGMLPPIDDKAEKVLKLV 367
+F+K L+ +M +S + + R +++ +MF+ +G+L IDD L +
Sbjct: 607 LFYKCDQRLLQEVVMLVKQQVYSPNDYLCRKNEKAKEMFIVKKGLLAVIDDDTGVELDSL 666
Query: 368 KARDSYGQVMGAVRKAQALKQQESVTCR 451
K ++G++ K L + SV+ R
Sbjct: 667 KEGHTFGELSIVQVKGNILGDRRSVSLR 694
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +2
Query: 278 SLKRSHDMFLANQGMLPPIDDKAEKVLKLVKARDSYGQVMGAVRKAQALKQQESVTCRPE 457
SL M + G + P+D ++V+ ++ + +YG + V++ Q + Q T + +
Sbjct: 227 SLNSMGPMDIGPPGYMQPLDPAIDEVVTNLRTKGAYGLGVDDVKRLQNILQTYEQTLQTK 286
Query: 458 TPLTTAETVE 487
LT + +E
Sbjct: 287 ELLTRRKQLE 296
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +2
Query: 278 SLKRSHDMFLANQGMLPPIDDKAEKVLKLVKARDSYGQVMGAVRKAQALKQQESVTCRPE 457
SL M + G + P+D ++V+ ++ + +YG + V++ Q + Q T + +
Sbjct: 227 SLNSMGPMDIGPPGYMQPLDPAIDEVVTNLRTKGAYGLGVDDVKRLQNILQTYEQTLQTK 286
Query: 458 TPLTTAETVE 487
LT + +E
Sbjct: 287 ELLTRRKQLE 296
>Z73098-1|CAA97330.2| 269|Caenorhabditis elegans Hypothetical
protein T21C9.1 protein.
Length = 269
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 448 TGDRLLLFQGLSLPHCTHDLSVTI 377
TGD++L F G+ + + THD +V +
Sbjct: 95 TGDKILSFDGIDMTYKTHDEAVEV 118
>U58756-4|AAC48082.1| 291|Caenorhabditis elegans Hypothetical
protein F58F9.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 446 CRPETPLTTAETVETAPLPSE 508
C+P TPL +T++ PLP E
Sbjct: 92 CKPYTPLKIKKTMQCGPLPEE 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,004,100
Number of Sequences: 27780
Number of extensions: 325085
Number of successful extensions: 701
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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