Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M16
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    27   0.15 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.59 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   4.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.6  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +2

Query: 497 LSTEENQQKPKMIQEPKTVETGILVDVCSAEQRENVYDS 613
           L+++ NQ   +  +  KTV  G+ +D+C+ E+R +V  S
Sbjct: 293 LASKSNQLS-REAKVTKTVLLGVKIDICNEEERNSVVAS 330


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +2

Query: 497 LSTEENQQKPKMIQEPKTVETGILVDVCSAEQREN 601
           L+++ NQ   +  +  KTV  G+ +D+C+ E+R +
Sbjct: 293 LASKSNQLS-REAKVTKTVLLGVKIDICNEEERNS 326


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 183 ITKLSPRIVLIENNCSMHSSGN 248
           +TK SP  V I NN S  SS +
Sbjct: 151 LTKTSPTPVSINNNTSTSSSAS 172


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 344 VLEEPVASFLQLNEINQPQLKSVTHFCLF 258
           +L +    F Q+N+  + Q+KSV  F +F
Sbjct: 206 ILSDICDKFEQINQHFRRQIKSVDLFVIF 234


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 344 VLEEPVASFLQLNEINQPQLKSVTHFCLF 258
           +L +    F Q+N+  + Q+KSV  F +F
Sbjct: 162 ILSDICDKFEQINQHFRRQIKSVDLFVIF 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,120
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)