Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_M16
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0157 - 1785738-1786247,1786334-1786666,1787248-1787624,178... 31 1.6
05_03_0236 - 10761133-10761642,10761729-10762061,10762783-107630... 31 1.6
01_06_0315 + 28416280-28416403,28416488-28416720,28417504-284178... 31 1.6
12_02_0250 - 16432160-16432672,16432751-16433066,16433524-164339... 30 2.1
12_01_0166 - 1241367-1241879,1241959-1242274,1243197-1243266,124... 30 2.1
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 30 2.1
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944... 30 2.1
12_02_1004 + 25202732-25202783,25202997-25203181,25203269-252035... 29 4.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 6.5
01_06_1342 - 36438869-36439459,36439567-36439627,36440751-364411... 29 6.5
04_03_0808 - 19872656-19873165,19873251-19873583,19874443-198745... 28 8.5
01_02_0083 - 10959091-10959222,10959318-10959501,10959935-109600... 28 8.5
>10_01_0157 -
1785738-1786247,1786334-1786666,1787248-1787624,
1787709-1787934,1788148-1788257,1788420-1788471
Length = 535
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 576 CAALNNAKMSTIL---QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGX 743
CA N + ++ L Q+ HL W R+F K+ + + + WD + T D+HY G
Sbjct: 305 CARAVNERFNSTLTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEHYNGY 364
Query: 744 CE 749
E
Sbjct: 365 IE 366
>05_03_0236 -
10761133-10761642,10761729-10762061,10762783-10763018,
10763103-10763328,10763416-10763796
Length = 561
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 576 CAALNNAKMSTIL---QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGX 743
CA N + ++ L Q+ HL W R+F K+ + + + WD + T D+HY G
Sbjct: 331 CARAVNERFNSTLTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEHYNGY 390
Query: 744 CE 749
E
Sbjct: 391 TE 392
>01_06_0315 +
28416280-28416403,28416488-28416720,28417504-28417818,
28417905-28418423
Length = 396
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 576 CAALNNAKMSTIL---QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGX 743
CA N + ++ L Q+ HL W R+F K+ + + + WD + T D+HY G
Sbjct: 163 CARAVNKRFNSTLTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEHYNGY 222
Query: 744 CE 749
E
Sbjct: 223 IE 224
>12_02_0250 -
16432160-16432672,16432751-16433066,16433524-16433962,
16434037-16434277,16434365-16434549,16434763-16434814
Length = 581
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 576 CAALNNAKMSTIL---QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGX 743
CA N + ++ L Q+ HL W R+F K+ + + + WD + T D+HY G
Sbjct: 350 CARAVNERFNSTLTGEQIKNHLKTWQRKFTKINRLRKVSAAGWDEKNIIITLDDEHYNGY 409
Query: 744 CE 749
E
Sbjct: 410 IE 411
>12_01_0166 -
1241367-1241879,1241959-1242274,1243197-1243266,
1243351-1243576,1243664-1243851,1244065-1244176,
1245371-1245664
Length = 572
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 576 CAALNNAKMSTIL---QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGX 743
CA N + ++ L Q+ HL W R+F K+ + + + WD + T D+HY G
Sbjct: 341 CARAVNKRFNSTLTGEQIKNHLKTWQRKFTKINRLRKVSAAGWDEKNFIITLDDEHYNGY 400
Query: 744 CE 749
E
Sbjct: 401 IE 402
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +2
Query: 314 GGSWPPAPREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSP 493
GGS EP+ G ++STA M RN+ N +++ L A + +++ SS+ P
Sbjct: 198 GGSTGGVKLEPQM---GQPDQNSTAQMMRNASNVKIEPPQLQALRSLSAVKMEQQSSD-P 253
Query: 494 ILSTEENQQKPKMIQEPK 547
++ QQ+ ++Q K
Sbjct: 254 SAFLQQQQQQQHLLQLTK 271
>05_03_0622 -
16293341-16293350,16293783-16294063,16294343-16294474,
16294561-16294741,16295054-16295096,16295183-16295249,
16296708-16296834,16296985-16297620,16298253-16298761,
16298842-16299157,16299615-16300053,16300128-16300353,
16300441-16300625,16300839-16300950,16301459-16301495,
16301977-16302011,16302497-16302810,16303463-16303475
Length = 1220
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 576 CAALNNAKMSTIL---QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGX 743
CA N + ++ L Q+ HL W R+F K+ + + + WD + T D+HY G
Sbjct: 498 CARAVNERFNSTLTGEQIKNHLKTWQRKFTKINRLRKVSAAGWDEKNFIITLDDEHYNGY 557
Query: 744 CE 749
E
Sbjct: 558 IE 559
>12_02_1004 +
25202732-25202783,25202997-25203181,25203269-25203509,
25203617-25204022,25204618-25204795,25204875-25205387
Length = 524
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3
Query: 582 ALNNAKMSTIL--QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGXCE 749
A+N ST+ Q+ HL W R+F K+ + + + WD + T D+HY G E
Sbjct: 296 AVNERFNSTLTGEQIKNHLKTWQRKFTKINRLRKVSAAGWDEKNFIITLDDEHYNGYIE 354
>04_03_0018 -
9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +2
Query: 317 GSWPPAPREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPI 496
GS A +P CA+ + + ST + + ++++ + L+P R ++STS++
Sbjct: 689 GSSFQANGDPTCANTSTDANESTQLELKRKSFLSLSTSSIFSPLSPRRNLLRSTSTDLSF 748
Query: 497 LS---TEENQ 517
LS T+ NQ
Sbjct: 749 LSPLQTKSNQ 758
>01_06_1342 -
36438869-36439459,36439567-36439627,36440751-36441130,
36441955-36442761
Length = 612
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 317 GSWPPAPREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAH-LAPDRRRIKSTSSNSP 493
GSWPP P + +++++ + H+ + A L+AH LAP +I + + +
Sbjct: 96 GSWPPPP---------AFYSYASSSSSYSPHSPTLAQAQLVAHGLAPPLPQIPTQNFSLS 146
Query: 494 ILSTEENQQKPK 529
+ S N P+
Sbjct: 147 LSSASSNPPPPQ 158
>04_03_0808 -
19872656-19873165,19873251-19873583,19874443-19874543,
19874628-19874853,19874941-19875079,19875339-19875451,
19875628-19875911,19876287-19876326
Length = 581
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 582 ALNNAKMSTIL--QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGXCE 749
A+N ST+ Q+ HL W R+F K+ + + WD + T D+HY G E
Sbjct: 354 AVNERFNSTLTGEQIKNHLKTWQRKFSKINRLRKVGAAGWDEKNFIITLDDEHYNGYIE 412
>01_02_0083 -
10959091-10959222,10959318-10959501,10959935-10960056,
10960143-10960472
Length = 255
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 615 QLWVHLGLW-RRFQKLR*IFYKTKSAWDPWXEVATDVDQHYYGXCE 749
Q+ HL W R+F K+ + + + WD + T D+HY G E
Sbjct: 65 QIKNHLKTWQRKFSKINRLRKVSAARWDEKNFIITLDDEHYNGYIE 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,425,711
Number of Sequences: 37544
Number of extensions: 353392
Number of successful extensions: 857
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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