Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_M15
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 32 0.45
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 32 0.45
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 29 3.1
U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC024813-5|AAK27883.1| 255|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024813-4|AAK27882.1| 297|Caenorhabditis elegans Hypothetical ... 29 4.2
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 28 9.6
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 140 bits (339), Expect = 1e-33
Identities = 67/153 (43%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Frame = +3
Query: 147 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLS 320
MAPP +ADLGK A D+F+KGY+FG K+D T++ VEF S + N SGK+ G+L
Sbjct: 1 MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLD 60
Query: 321 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFT 500
K+ + YG+T TEKWNT+N L T I + ++ GLKVTL+ +AP G ++GK+K +
Sbjct: 61 VKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWA 120
Query: 501 NDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAG 599
T V ++ + A PV++ A V + GWL G
Sbjct: 121 LPTARVTADVGVTSA-PVINAAGVFSRDGWLIG 152
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 611 FDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWTXG 781
FD+ K + + A G+ + + LH+ V N DFG S+Y KV+ ++ G + W G
Sbjct: 157 FDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASLYHKVASNVEVGTQLGWKVG 213
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 240 TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 395
T+S G + +S G+ S K+ V +G T EKWN D + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 240 TKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATD 395
T+S G + +S G+ S K+ V +G T EKWN D + TD
Sbjct: 1044 TRSRRGANMEDDRKHSSKSNSA-GNASKKYKVWAWGSTGEEKWNVDMEIGTD 1094
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 342 YGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND-TVAV 518
Y TFT W+T++T+ T QD + + T E T A + + T T + T +V
Sbjct: 460 YPSTFTSSWSTESTVLT-TQQQDTTTSVILETTEATDAASSSLSPDDVSTQLTTEATTSV 518
Query: 519 NTNLDLD 539
+++ D
Sbjct: 519 VSSVPPD 525
>U00052-3|AAK21426.1| 308|Caenorhabditis elegans Hypothetical
protein K02F3.4 protein.
Length = 308
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -3
Query: 713 RNLYHCLRLCGEQSHQIGNLEQSCSWRTLLFVYQTGCD 600
RNL CL Q HQI + EQS L F +Q CD
Sbjct: 47 RNLPDCLTTTVPQLHQINSAEQS----PLQFTHQPNCD 80
>AC024813-5|AAK27883.1| 255|Caenorhabditis elegans Hypothetical
protein Y54F10AL.1b protein.
Length = 255
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 258 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 398
+E G+ S E+ K+F +S+ ++ + LTF +W + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229
>AC024813-4|AAK27882.1| 297|Caenorhabditis elegans Hypothetical
protein Y54F10AL.1a protein.
Length = 297
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 258 VEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 398
+E G+ S E+ K+F +S+ ++ + LTF +W + L T I
Sbjct: 184 LEGGGGVASQSETRKIF-LFTSRIFIEAFSLTFVAEWGDRSQLTTII 229
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 303 VFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI 398
VFG LSS DYG+T K+ TD I
Sbjct: 252 VFGELSSSKKTIDYGITKQWKYRTDGRFELSI 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,403,876
Number of Sequences: 27780
Number of extensions: 387866
Number of successful extensions: 1040
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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