Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M15
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.7  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   3.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 616 IKLGVTPASQPW*FSTAATSTT 551
           + +G +PAS P   S AATS+T
Sbjct: 817 LMVGNSPASSPRYLSAAATSST 838


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 444 GTFAPQTGTKTGKLKTSFTNDTVAVNTNL 530
           GT   Q    TG    +F NDTV+  T +
Sbjct: 86  GTSESQWEDVTGSTPLTFVNDTVSFTTTV 114


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +3

Query: 222 FKLDLKTKSESGVEFTSGITSNQ 290
           F+LDL+ + E+G + +S IT+ +
Sbjct: 174 FQLDLQLQDEAGGDISSFITNGE 196


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/26 (23%), Positives = 14/26 (53%)
 Frame = +1

Query: 592 WLVSHPV*YTKSKVLQEQLCSRLPIW 669
           W ++ P+ Y + + L+  L +   +W
Sbjct: 136 WAITDPINYAQKRTLKRVLATIAGVW 161


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/26 (23%), Positives = 14/26 (53%)
 Frame = +1

Query: 592 WLVSHPV*YTKSKVLQEQLCSRLPIW 669
           W ++ P+ Y + + L+  L +   +W
Sbjct: 136 WAITDPINYAQKRTLKRVLATIAGVW 161


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 6/26 (23%), Positives = 14/26 (53%)
 Frame = +1

Query: 592 WLVSHPV*YTKSKVLQEQLCSRLPIW 669
           W ++ P+ Y + + L+  L +   +W
Sbjct: 136 WAITDPINYAQKRTLKRVLATIAGVW 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,485
Number of Sequences: 438
Number of extensions: 4734
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)