Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M13
         (956 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...   177   1e-44
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...   177   1e-44
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...   177   1e-44
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...   177   2e-44
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...   177   2e-44
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...   173   2e-43
AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-P...    30   4.1  

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score =  177 bits (432), Expect = 1e-44
 Identities = 81/105 (77%), Positives = 91/105 (86%)
 Frame = +2

Query: 83  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 263 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLK 397
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK LK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKALK 105


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score =  177 bits (432), Expect = 1e-44
 Identities = 81/105 (77%), Positives = 91/105 (86%)
 Frame = +2

Query: 83  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 263 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLK 397
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK LK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKALK 105


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score =  177 bits (432), Expect = 1e-44
 Identities = 81/105 (77%), Positives = 91/105 (86%)
 Frame = +2

Query: 83  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPS 60

Query: 263 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLK 397
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK LK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKALK 105


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score =  177 bits (430), Expect = 2e-44
 Identities = 81/105 (77%), Positives = 90/105 (85%)
 Frame = +2

Query: 83  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 263 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLK 397
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK LK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKALK 105


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score =  177 bits (430), Expect = 2e-44
 Identities = 81/105 (77%), Positives = 90/105 (85%)
 Frame = +2

Query: 83  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPS 60

Query: 263 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLK 397
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK LK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKALK 105


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score =  173 bits (422), Expect = 2e-43
 Identities = 80/105 (76%), Positives = 89/105 (84%)
 Frame = +2

Query: 83  MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPA 262
           MVQRLT RRRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI  +RP+
Sbjct: 1   MVQRLTLRRRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPS 60

Query: 263 ERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLK 397
           ER R+  R KTV R YGGVLCH C+++RIVRAFLIEEQKIVK LK
Sbjct: 61  ERPRMSKRLKTVSRTYGGVLCHSCLRERIVRAFLIEEQKIVKALK 105


>AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-PA
           protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +2

Query: 152 RTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLC-YRKKTVKRVYGGVLCH 328
           + P G L+Y  + KP  + RC  C       + A P +R+     RK   ++    V  H
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKSWNRKTQEQVKPH 174

Query: 329 KC 334
           +C
Sbjct: 175 RC 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,204,235
Number of Sequences: 53049
Number of extensions: 385387
Number of successful extensions: 1068
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)