Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M09
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0373 + 2673483-2673506,2673952-2674134                           30   2.1  
01_06_0998 + 33685051-33685143,33685231-33685322,33685490-336855...    29   6.4  
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506...    28   8.5  

>02_01_0373 + 2673483-2673506,2673952-2674134
          Length = 68

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +3

Query: 384 KPMLAQHIGVGTFSLSTLLYWSYCRYRWSQQRFDAQLLQDALKDKILYEGTAVEKEMEKK 563
           K MLA  +  G   L  L+  +YCR+ W    F A LL D   +  + E   + +E    
Sbjct: 8   KDMLAAEVPAGGRYLFLLVDQTYCRWMW-MVMFGAGLLVDVNNENDINERETMTREKRND 66

Query: 564 G 566
           G
Sbjct: 67  G 67


>01_06_0998 +
           33685051-33685143,33685231-33685322,33685490-33685587,
           33686671-33686826,33686927-33687546,33687888-33687958,
           33688072-33688326,33688426-33688543,33688671-33688842,
           33688928-33689469
          Length = 738

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 54  LICYYIQYGPILKYVRTIF 110
           ++C  I YGPIL +V T+F
Sbjct: 393 VLCIEITYGPILNFVNTVF 411


>04_04_0964 -
           29749624-29749649,29749742-29749945,29750036-29750634,
           29750742-29750826,29750914-29751562,29751568-29751643,
           29753891-29753957,29754097-29754998,29756579-29756790
          Length = 939

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 471 QQRFDAQLLQDA-LKDKILYEGTAVEKEMEK 560
           Q  +DAQL  DA ++D+ LYE  ++ KEM +
Sbjct: 385 QMGYDAQLEGDAYIEDRHLYEAESIVKEMRE 415


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,063,567
Number of Sequences: 37544
Number of extensions: 285651
Number of successful extensions: 638
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)