Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M09
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    25   3.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   6.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.2  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +3

Query: 333 GIGTGIGFGLAAFVKTSKPMLAQHIGVGTFSLSTLLY---WSYCRYRWSQQRFDA 488
           G+G G  F + A +     ++A    +  + +   +Y   W++CR  W     D+
Sbjct: 159 GVGYGQLFSVTALITYYSSLMAP---IARYMIDAFMYPLPWAHCRSEWQPNCIDS 210


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 462 RWSQQRFDAQLLQDALKDKILYEGTAVEKEM 554
           RWS + F+  L  + L+D+ ++   A  +E+
Sbjct: 232 RWSTRFFEKDLFVEILRDQDIFGHVATPEEL 262


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 749  YIYFLSTFTYEEIYGSFI 696
            Y + L+T+TY E YG  I
Sbjct: 1870 YEHRLTTYTYSETYGHLI 1887


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,339
Number of Sequences: 2352
Number of extensions: 12749
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)