BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_M09
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX323046-2|CAI11053.1| 130|Homo sapiens family with sequence si... 75 4e-13
BX323046-1|CAI11052.1| 118|Homo sapiens family with sequence si... 75 4e-13
BC095486-1|AAH95486.1| 118|Homo sapiens family with sequence si... 75 4e-13
BC062419-1|AAH62419.1| 118|Homo sapiens family with sequence si... 75 4e-13
BC018519-1|AAH18519.1| 118|Homo sapiens family with sequence si... 75 4e-13
>BX323046-2|CAI11053.1| 130|Homo sapiens family with sequence
similarity 36, member A protein.
Length = 130
Score = 74.5 bits (175), Expect = 4e-13
Identities = 35/92 (38%), Positives = 53/92 (57%)
Frame = +3
Query: 291 DISKIPCFRESFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTFSLSTLLYWSYCRYRWS 470
D+ PC R S LYG + G F+ TS+ + +GVG F L TL W +CRY ++
Sbjct: 35 DVENTPCARHSILYGSLGSVVAGFGHFLFTSRIRRSCDVGVGGFILVTLGCWFHCRYNYA 94
Query: 471 QQRFDAQLLQDALKDKILYEGTAVEKEMEKKG 566
+QR ++ ++ +K KILYEGT ++ E + G
Sbjct: 95 KQRIQERIAREEIKKKILYEGTHLDPERKHNG 126
>BX323046-1|CAI11052.1| 118|Homo sapiens family with sequence
similarity 36, member A protein.
Length = 118
Score = 74.5 bits (175), Expect = 4e-13
Identities = 35/92 (38%), Positives = 53/92 (57%)
Frame = +3
Query: 291 DISKIPCFRESFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTFSLSTLLYWSYCRYRWS 470
D+ PC R S LYG + G F+ TS+ + +GVG F L TL W +CRY ++
Sbjct: 23 DVENTPCARHSILYGSLGSVVAGFGHFLFTSRIRRSCDVGVGGFILVTLGCWFHCRYNYA 82
Query: 471 QQRFDAQLLQDALKDKILYEGTAVEKEMEKKG 566
+QR ++ ++ +K KILYEGT ++ E + G
Sbjct: 83 KQRIQERIAREEIKKKILYEGTHLDPERKHNG 114
>BC095486-1|AAH95486.1| 118|Homo sapiens family with sequence
similarity 36, member A protein.
Length = 118
Score = 74.5 bits (175), Expect = 4e-13
Identities = 35/92 (38%), Positives = 53/92 (57%)
Frame = +3
Query: 291 DISKIPCFRESFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTFSLSTLLYWSYCRYRWS 470
D+ PC R S LYG + G F+ TS+ + +GVG F L TL W +CRY ++
Sbjct: 23 DVENTPCARHSILYGSLGSVVAGFGHFLFTSRIRRSCDVGVGGFILVTLGCWFHCRYNYA 82
Query: 471 QQRFDAQLLQDALKDKILYEGTAVEKEMEKKG 566
+QR ++ ++ +K KILYEGT ++ E + G
Sbjct: 83 KQRIQERIAREEIKKKILYEGTHLDPERKHNG 114
>BC062419-1|AAH62419.1| 118|Homo sapiens family with sequence
similarity 36, member A protein.
Length = 118
Score = 74.5 bits (175), Expect = 4e-13
Identities = 35/92 (38%), Positives = 53/92 (57%)
Frame = +3
Query: 291 DISKIPCFRESFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTFSLSTLLYWSYCRYRWS 470
D+ PC R S LYG + G F+ TS+ + +GVG F L TL W +CRY ++
Sbjct: 23 DVENTPCARHSILYGSLGSVVAGFGHFLFTSRIRRSCDVGVGGFILVTLGCWFHCRYNYA 82
Query: 471 QQRFDAQLLQDALKDKILYEGTAVEKEMEKKG 566
+QR ++ ++ +K KILYEGT ++ E + G
Sbjct: 83 KQRIQERIAREEIKKKILYEGTHLDPERKHNG 114
>BC018519-1|AAH18519.1| 118|Homo sapiens family with sequence
similarity 36, member A protein.
Length = 118
Score = 74.5 bits (175), Expect = 4e-13
Identities = 35/92 (38%), Positives = 53/92 (57%)
Frame = +3
Query: 291 DISKIPCFRESFLYGIGTGIGFGLAAFVKTSKPMLAQHIGVGTFSLSTLLYWSYCRYRWS 470
D+ PC R S LYG + G F+ TS+ + +GVG F L TL W +CRY ++
Sbjct: 23 DVENTPCARHSILYGSLGSVVAGFGHFLFTSRIRRSCDVGVGGFILVTLGCWFHCRYNYA 82
Query: 471 QQRFDAQLLQDALKDKILYEGTAVEKEMEKKG 566
+QR ++ ++ +K KILYEGT ++ E + G
Sbjct: 83 KQRIQERIAREEIKKKILYEGTHLDPERKHNG 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,579,791
Number of Sequences: 237096
Number of extensions: 1781634
Number of successful extensions: 6602
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6599
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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