Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_M07
(1131 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 38 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.006
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.024
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 32 0.13
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.17
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.30
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 4.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 6.4
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 37.9 bits (84), Expect = 0.003
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 2/105 (1%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSR--CPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXS 923
P P+ PP P PP++ P PPS LP PP P P P N S
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPS--APSLPSAVPPMPPKVPPPPLSQAPVANTS 215
Query: 924 XLAXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEPXSXXXL 1058
S P + R P AS+ P P S L
Sbjct: 216 SRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVPPSSYVL 260
Score = 36.3 bits (80), Expect = 0.008
Identities = 31/87 (35%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 756 PPAXXPPXPXXXX-PPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXLA 932
P A PP P PP+ P P P P PP AP P LPPP + A
Sbjct: 125 PSAPAPPTPQSELRPPTSAP---PRPSIPPPSPASAPPIPSKAP-PIPSSLPPP--AQPA 178
Query: 933 XSLPXPXSAXSLPSPGXXPXXXRXPLP 1013
+ P SA SLPS P + P P
Sbjct: 179 APVKSPPSAPSLPS-AVPPMPPKVPPP 204
Score = 35.5 bits (78), Expect = 0.014
Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 5/108 (4%)
Frame = +3
Query: 822 PPSXXCXPLPXXX--PPGXXXAPXPXRPXLPPPNXSXLAXSLPXPXSAXSLPSPGXXPXX 995
PPS P P PP P RP +PPP+ A + P P A +PS P
Sbjct: 124 PPSAPAPPTPQSELRPP----TSAPPRPSIPPPSP---ASAPPIPSKAPPIPSSLPPPAQ 176
Query: 996 XRXPLPXXASLXPEPXSXXXLXLXSXPPXRSXSRXA---XRPXXLPPP 1130
P+ S P + + PP S + A RP PP
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 32.3 bits (70), Expect = 0.13
Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXP-PSRCPXXXPPSXXCXPLPXXXP-PGXXXAPXPXRPXLPPPNXS 923
P PA PP P P PS P PP+ P+ P A P P +PPP S
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLP---PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Query: 924 XLAXSLPXPXSAXSLPSPGXXP 989
+ + P G P
Sbjct: 208 QAPVANTSSRPSSFAPPAGHAP 229
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +1
Query: 745 AXXAPPXSP-PPXPPXXXXPPXVXXXXLXQXXVPPSXXGXPPAGXRPPXXXAPXSLPRXG 921
A APP +P PP P PP PPS PP + P P SLP
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPP--RPSIPPPSPASAPPIPSKAP--PIPSSLPPPA 175
Query: 922 XXSRP 936
+ P
Sbjct: 176 QPAAP 180
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.003
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXL 929
P+P A PP P PPS P PS P+P P P P P P +
Sbjct: 1182 PKPAAGVPPVP----PPSEAPPVPKPSVGVPPVP--PPSTAPPVPTPSAGLPPVPVPTAK 1235
Query: 930 AXSLPXPXS-AXSLPSP 977
A +P P S A S+ +P
Sbjct: 1236 APPVPAPSSEAPSVSTP 1252
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/94 (29%), Positives = 34/94 (36%)
Frame = +3
Query: 759 PAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXLAXS 938
P+ PP P P S P PS P+P P G P P P P S
Sbjct: 1060 PSAPPPVPA---PSSEIPSIPAPSG-APPVPA--PSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Query: 939 LPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEP 1040
+P P A +P P P+P A P+P
Sbjct: 1114 VPAPSGAPPVPKPSVAAPP--VPVPSGAPPVPKP 1145
Score = 36.3 bits (80), Expect = 0.008
Identities = 28/101 (27%), Positives = 35/101 (34%), Gaps = 5/101 (4%)
Frame = +3
Query: 753 RPPAXXPPXPXXXXPP-----SRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPN 917
+P + P P PP S+ P PS P+P P P P P P
Sbjct: 998 KPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPV--PSTAPPVPIPTSTP-PVPK 1054
Query: 918 XSXLAXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEP 1040
S A S P P A S P P+P + + P P
Sbjct: 1055 SSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Score = 36.3 bits (80), Expect = 0.008
Identities = 28/100 (28%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXX-PPSRCPXXXPP-SXXCXPLPXXXPPGXXXAPXPXRPXLPP-PNX 920
P P + P P PP P PP P P P P PP P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 921 SXLAXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEP 1040
S A +P P A +P P P P A P+P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPP--VPAPSGAPPVPKP 1164
Score = 35.1 bits (77), Expect = 0.018
Identities = 35/130 (26%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Frame = +3
Query: 750 PRPPAXXP-PXPXXXXPPSRCP-XXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPP-PNX 920
P P P P P PP P PP P P P P PP P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 921 SXLAXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEPXSXXXLXLXSXPPXRSXSRX 1100
S A +P P A +P P P+P +S P P + PP S +
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPS----VAAPPVPAPSSGIP-PVPKPAAGVPPVPPP-SEAPP 1199
Query: 1101 AXRPXXLPPP 1130
+P PP
Sbjct: 1200 VPKPSVGVPP 1209
Score = 33.5 bits (73), Expect = 0.055
Identities = 29/108 (26%), Positives = 32/108 (29%)
Frame = +1
Query: 754 APPXSPPPXPPXXXXPPXVXXXXLXQXXVPPSXXGXPPAGXRPPXXXAPXSLPRXGXXSR 933
AP PP P P V VP G PP PP P P G
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPS-EAPPVPKPSVGVPPVP--PPSTAPPVPTPSAGLPPV 1229
Query: 934 PHXXXLAXRXRSPXQXXXRXXXXXPSRPXPPSXXSPXPSXXSLXXPXP 1077
P A +P S P P S SP P+ S+ P
Sbjct: 1230 PVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP 1277
Score = 31.9 bits (69), Expect = 0.17
Identities = 29/108 (26%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Frame = +3
Query: 750 PRPPAXXP-PXPXXXXPPSRCPXXXP----PSXXCXPLPXXXPPGXXXAPXPXRPXLPPP 914
P P P P P PP P P PS P+P P G P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP--APSGAPPVPKPSVAAPPVP 1172
Query: 915 NXSXLAXSLPXPXS-AXSLPSPGXXPXXXR-----XPLPXXASLXPEP 1040
S +P P + +P P P + P+P ++ P P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 30.7 bits (66), Expect = 0.39
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXX---PP------GXXXAPXPXR-P 899
P+P PP P PS P PS P+P PP G P P P
Sbjct: 1143 PKPSVAAPPVPA----PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 900 XLPPPNXSXLAXSLPXPXSAXSLPSP 977
+P P+ +P P +A +P+P
Sbjct: 1199 PVPKPSVG--VPPVPPPSTAPPVPTP 1222
Score = 30.7 bits (66), Expect = 0.39
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Frame = +3
Query: 750 PRPPAXXPPXPX--XXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXS 923
P+P PP P PP P P P P PP P P +PPP+ +
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPP---VPPPSEAPP--VPKPSVGVPPVPPPSTA 1216
Query: 924 XLAXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXP 1034
P P + LP P P P+P +S P
Sbjct: 1217 P-----PVPTPSAGLP-PVPVPTAKAPPVPAPSSEAP 1247
Score = 27.5 bits (58), Expect = 3.6
Identities = 27/113 (23%), Positives = 36/113 (31%), Gaps = 6/113 (5%)
Frame = +2
Query: 809 SXPXASXXPXXPPPXXGAPRXXXGPXXXXXXXXXXEXVXTRXLTXXPX--LXVLAPLXRX 982
S P + P PPP P ++ ++ P L + P+ +
Sbjct: 959 SGPRPAAPPSIPPPLP-VSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKL 1017
Query: 983 XSAXXXXPPPXXRLPRXX----APLXPXSXSXXPSPXSLTXXXRAPPXXPPPS 1129
S P P P AP P S P P S + APP P PS
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.006
Identities = 45/186 (24%), Positives = 55/186 (29%), Gaps = 14/186 (7%)
Frame = +3
Query: 612 SPRPXPRXPXXX*PHPPPXXRXPXSXXXXXXXXXXXXXXVXXXXXXP------RPPAXXP 773
S RP R P P PPP P S + P +PP P
Sbjct: 238 SSRPPERVPSLSAPAPPPI--PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Query: 774 PXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXLAXSLPXP- 950
+ PP PP + P PPP S A S+P P
Sbjct: 296 SSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Query: 951 --XSAXSLPSPGXXPXXXRXPLPXXASL-----XPEPXSXXXLXLXSXPPXRSXSRXAXR 1109
SA P P P R P P +S P + + PP + SR +
Sbjct: 356 QGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTP 415
Query: 1110 PXXLPP 1127
P PP
Sbjct: 416 PVPTPP 421
Score = 32.3 bits (70), Expect = 0.13
Identities = 29/127 (22%), Positives = 32/127 (25%), Gaps = 3/127 (2%)
Frame = +1
Query: 529 SPPXPPSXXRXXRPXLXPXXXTGXXPAFPPGPXPXXPXXXDPTHHXXVXARXXXXXXXXX 708
+PP PP P + + PP P P P P A
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 709 XXXXXXQXXXXXAXXAPPXSP---PPXPPXXXXPPXVXXXXLXQXXVPPSXXGXPPAGXR 879
APP P P PP P PP PPA
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP----LPPAAPA 475
Query: 880 PPXXXAP 900
PP AP
Sbjct: 476 PPPAPAP 482
Score = 31.5 bits (68), Expect = 0.22
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +3
Query: 756 PPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAP-----XPXRPXLPPPNX 920
PP PP PPS P P P PP AP P P LPP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 921 SXLAXSLPXP 950
+ P P
Sbjct: 475 APPPAPAPAP 484
Score = 30.7 bits (66), Expect = 0.39
Identities = 34/126 (26%), Positives = 39/126 (30%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXL 929
P PP PP PP P PP + P PPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP----- 393
Query: 930 AXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEPXSXXXLXLXSXPPXRSXSRXAXR 1109
++P SA +LP G P+P SL P S S PP A
Sbjct: 394 --AIPG-RSAPALPPLGNASRTSTPPVPTPPSL---PPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 1110 PXXLPP 1127
P LPP
Sbjct: 448 P--LPP 451
Score = 30.7 bits (66), Expect = 0.39
Identities = 27/95 (28%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Frame = +3
Query: 756 PPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXLAX 935
PPA P P P P S P P PP + P P PP+ A
Sbjct: 388 PPAPPPAIPGRSAPA--LPPLGNASRTSTP-PVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 936 SLPX--PXSAXSLPSPGXXPXXXRXPLPXXASLXP 1034
+ P P + + P P P PLP A P
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAP--PLPPAAPAPP 477
Score = 29.5 bits (63), Expect = 0.90
Identities = 36/136 (26%), Positives = 40/136 (29%), Gaps = 4/136 (2%)
Frame = +2
Query: 734 PPXXXXXPPRXXPPXTXXTAXXLPX-SXPXASXXPXXPPPXXGAPRXXXGPXXXXXXXXX 910
PP PP P T P S A P PPP P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 911 XEXVXTRXLTXXPXLXVLAPLXRXXSAXXXXP---PPXXRLPRXXAPLXPXSXSXXPSPX 1081
V T P L AP SA P P LP AP+ P + P+
Sbjct: 414 TPPVPT-----PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP-PSAPIAPPLPAGMPAAP 467
Query: 1082 SLTXXXRAPPXXPPPS 1129
L APP P P+
Sbjct: 468 PLPPAAPAPPPAPAPA 483
Score = 29.5 bits (63), Expect = 0.90
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 771 PPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXA-PXPXRPXLPPPNXSXLAXSLPX 947
PP P PPS P PPS P P G A P P + PP + + + P
Sbjct: 415 PPVPT---PPS-LPPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL 469
Query: 948 PXSAXSLPSPGXXP 989
P +A + P P P
Sbjct: 470 PPAAPA-PPPAPAP 482
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.024
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Frame = +3
Query: 750 PRPPAXXPPX-PXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSX 926
P P PP P PP PP P P PP A P P PPP +
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP--MPAGPPSAP--PPPLPAS 1738
Query: 927 LAXSLPXPXSAXSL 968
A S+P P +L
Sbjct: 1739 SAPSVPNPGDRSAL 1752
Score = 29.5 bits (63), Expect = 0.90
Identities = 23/97 (23%), Positives = 30/97 (30%), Gaps = 2/97 (2%)
Frame = +3
Query: 795 PPSRCPXXXPPSXX--CXPLPXXXPPGXXXAPXPXRPXLPPPNXSXLAXSLPXPXSAXSL 968
P + P PP+ P+ P AP P PP S L ++P +
Sbjct: 1439 PSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMI 1498
Query: 969 PSPGXXPXXXRXPLPXXASLXPEPXSXXXLXLXSXPP 1079
PS P P +S P S PP
Sbjct: 1499 PSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPP 1535
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 1025 PRXXAPLXPXSXSXXPSPXSLTXXXRAPPXXPPP 1126
P+ AP P P P S PP PPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 32.3 bits (70), Expect = 0.13
Identities = 25/97 (25%), Positives = 32/97 (32%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXL 929
P+PP P P P P P P P P RP +P
Sbjct: 575 PQPPVA-PVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPE--- 630
Query: 930 AXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEP 1040
A S+P P +A +P P P+ A P+P
Sbjct: 631 APSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQP 667
Score = 29.9 bits (64), Expect = 0.68
Identities = 26/99 (26%), Positives = 32/99 (32%), Gaps = 2/99 (2%)
Frame = +3
Query: 750 PRPPAXX--PPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXS 923
P+PPA P P PP+ PS P P P P +P
Sbjct: 515 PQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPE---- 570
Query: 924 XLAXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEP 1040
A S+P P A P P P+ A P+P
Sbjct: 571 --ALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQP 607
Score = 29.5 bits (63), Expect = 0.90
Identities = 24/99 (24%), Positives = 31/99 (31%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXL 929
P P+ P P P PP P P P P +P P + +
Sbjct: 554 PEAPSV-PQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPV 612
Query: 930 AXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEPXS 1046
A +P S P+ P P P A + PE S
Sbjct: 613 APEVP---SVPQRPAVPVVPEAPSVPQPPAAPVVPEVPS 648
Score = 29.5 bits (63), Expect = 0.90
Identities = 26/115 (22%), Positives = 33/115 (28%), Gaps = 5/115 (4%)
Frame = +3
Query: 750 PRPPAXX--PPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXS 923
P+PP P P PP PS P P P P +P
Sbjct: 590 PQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSV 649
Query: 924 XLAXSLPXPXSAXSLPSPGXXPXXXR---XPLPXXASLXPEPXSXXXLXLXSXPP 1079
++P A S+P P P P P + PE + PP
Sbjct: 650 PQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPPLPP 704
Score = 29.1 bits (62), Expect = 1.2
Identities = 29/127 (22%), Positives = 36/127 (28%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSXL 929
P+ PA P P P R P P P P P P P
Sbjct: 545 PQRPAA-PVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPE--- 600
Query: 930 AXSLPXPXSAXSLPSPGXXPXXXRXPLPXXASLXPEPXSXXXLXLXSXPPXRSXSRXAXR 1109
A S+P P A P P P+ A P+P + + P R
Sbjct: 601 APSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPE 660
Query: 1110 PXXLPPP 1130
+P P
Sbjct: 661 APSVPQP 667
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.17
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +3
Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPP 911
P PPA P P P+ P P P P PPG A P P PP
Sbjct: 734 PPPPAVIVPTPA----PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.30
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -3
Query: 910 GGRXGRXGXGAXXXPGGXXXGR-GXXXXXGGXXXGXREGGXXXXGXGGXXAGGRG 749
G R GR G + GG GR G GG G R G G G GGRG
Sbjct: 6 GSRGGRGG--SRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -1
Query: 762 RGGXXXXXGGXLXWGXGXGQRGXGGEXAGXDXXVVGGVXXGGXXGAGAGGKXXXPPRXXX 583
RGG GG G G + G GG G GG GA G K P
Sbjct: 25 RGGFGGGRGGARGGGRGGARGGRGGRGGARGGR---GGSSGGRGGAKGGAKVIIEPHRHA 81
Query: 582 G 580
G
Sbjct: 82 G 82
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = -1
Query: 771 GXXRGGXXXXXGGXLXWGXGXGQRGXGGEXAGXDXXVVGGVXXGGXXGAGAG 616
G RGG GG +G G G GG G GG G+ G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 3.6
Identities = 24/99 (24%), Positives = 31/99 (31%), Gaps = 4/99 (4%)
Frame = +3
Query: 756 PPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPG-XXXAPXPXRPXLPPPNXSXLA 932
P + P P P + P PS P P PP A P + ++
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVS 220
Query: 933 XSLP---XPXSAXSLPSPGXXPXXXRXPLPXXASLXPEP 1040
+P P A LP+P P P S P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 3.6
Identities = 21/78 (26%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = +3
Query: 756 PPAXXPPXPXXXXPPSRCPXXXPP--SXXCXPLPXXX--PPGXXXAPXPXRPXLPPPNXS 923
PP P P + P P PLP PPG P P P +P N S
Sbjct: 461 PPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMS 520
Query: 924 XLAXSLPXPXSAXSLPSP 977
P +P+P
Sbjct: 521 QPPMVPPGMALPPGMPAP 538
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 4.8
Identities = 23/78 (29%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +3
Query: 903 LPPPNXSXLAXSLPXPXSAXSLPSPGXXPXXX--RXPLPXXASLXPEPXSXXXLXLXSXP 1076
LPPP+ S A P LP P R P P +S P S P
Sbjct: 851 LPPPSTSTTAGWNDAPMLG-QLPMRRAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPP 909
Query: 1077 PXRSXSRXAXRPXXLPPP 1130
P + S A P PP
Sbjct: 910 PPPTASMTASAPAIASPP 927
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 6.4
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = -3
Query: 976 GEGSEXAEXGXGSEXASXDXFGGGRXGRXGXGAXXX-PGGXXXGRGXXXXXGGXXXGXRE 800
G GS G G FGG G G PGG G G G G
Sbjct: 194 GGGSGGPPPGPGG-FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
Query: 799 GGXXXXGXGGXXAGGRG 749
G G G GG G
Sbjct: 253 GFGGGPGGFGGGPGGHG 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,806,969
Number of Sequences: 5004
Number of extensions: 21214
Number of successful extensions: 190
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 601638964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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