Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M07
         (1131 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    39   2e-04
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.19 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.25 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   7.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   9.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   9.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   9.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 39.1 bits (87), Expect = 2e-04
 Identities = 27/92 (29%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
 Frame = +3

Query: 753  RPPAXXPPXPXXXXPPSRC--PXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSX 926
            RP    PP P    PP     P    P+    P P    P     P P RP +PP     
Sbjct: 180  RPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPG 239

Query: 927  LAXSL-PXPXSAXSLPSPG--XXPXXXRXPLP 1013
            +   + P P SA  +  P     P   R P P
Sbjct: 240  MQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNP 271



 Score = 25.0 bits (52), Expect = 4.1
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = +1

Query: 535 PXPPSXXRXXRPXLXPXXXTGXXPAFPPGP 624
           P PP      RP + P    G  P   P P
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRP 248


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.5 bits (63), Expect = 0.19
 Identities = 19/59 (32%), Positives = 21/59 (35%)
 Frame = -1

Query: 699 GXGGEXAGXDXXVVGGVXXGGXXGAGAGGKXXXPPRXXXGXKXRARXAGXXGGXGGGXE 523
           G GG  +G      GG   GG  G G GG      R            G  GG GGG +
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGP-GPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQ 258



 Score = 26.6 bits (56), Expect = 1.3
 Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
 Frame = -3

Query: 913 GGGRXGRXGXGAXXXPG-GXXXGRGXXXXXGGXXXGXREGGXXX-XGXGGXXAGGRG 749
           GGG  G  G G+   PG G   G G            REGG     G GG    GRG
Sbjct: 208 GGGAPG-GGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGRG 263



 Score = 24.6 bits (51), Expect = 5.4
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = -1

Query: 630 GAGAGGKXXXPPRXXXGXKXRARXAGXXGGXGGGXEG 520
           G G+G     P         R+   G  GG GGG  G
Sbjct: 144 GGGSGAIHASPNAQNPSSGGRSSSGGGGGGGGGGGAG 180


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 0.25
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
 Frame = -1

Query: 774 GGXXRGGXXXXXGGXLXWGXGXGQRGXGGEXAGXDXX-VVGGVXXGGXXGAGAGG 613
           G    GG     GG L  G      G GG  AG       GG   G   G G+GG
Sbjct: 813 GNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGG 867



 Score = 25.8 bits (54), Expect = 2.3
 Identities = 19/66 (28%), Positives = 21/66 (31%)
 Frame = -1

Query: 810 DXGRXXAVXXVXGGXXRGGXXXXXGGXLXWGXGXGQRGXGGEXAGXDXXVVGGVXXGGXX 631
           D      V  V      GG      G    G G G  G G +    +    GGV  G   
Sbjct: 503 DLASGVVVNAVLAAGGGGGGSGCVNGSRTVGAG-GMAGGGSDGPEYEGAGRGGVGSGIGG 561

Query: 630 GAGAGG 613
           G G GG
Sbjct: 562 GGGGGG 567



 Score = 23.8 bits (49), Expect = 9.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 803 GGXXXXGGXGGGXXGGAXXA 744
           GG    GG GGG  GG   A
Sbjct: 293 GGVGGGGGGGGGGGGGGGSA 312


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 16/55 (29%), Positives = 16/55 (29%)
 Frame = +3

Query: 750 PRPPAXXPPXPXXXXPPSRCPXXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPP 914
           P PP   PP P    P        PP           PP     P P    LP P
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYPIIIPLPLP 641



 Score = 26.2 bits (55), Expect = 1.8
 Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
 Frame = +3

Query: 753 RPPAXXPPXPXXXXPPSRCP--XXXPPSXXCXPLPXXXPPGXXXAPXPXRPXLPPPNXSX 926
           +PP   PP P    PPS         P+    PLP     G   A  P    +P P    
Sbjct: 580 QPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLL--GFGGAAPPVTILVPYPIIIP 637

Query: 927 LAXSLPXP 950
           L   +P P
Sbjct: 638 LPLPIPVP 645



 Score = 24.6 bits (51), Expect = 5.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 757 PPXSPPPXPPXXXXP 801
           PP +PPP PP    P
Sbjct: 581 PPPAPPPPPPMGPPP 595



 Score = 21.0 bits (42), Expect(2) = 9.3
 Identities = 11/39 (28%), Positives = 14/39 (35%)
 Frame = +1

Query: 523 LXSPPXPPSXXRXXRPXLXPXXXTGXXPAFPPGPXPXXP 639
           L +P  P +  +   P   P       P  PP P P  P
Sbjct: 555 LRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGP 593



 Score = 20.6 bits (41), Expect(2) = 9.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 514 GXPLXSPPXPP 546
           G PL  PP PP
Sbjct: 525 GGPLGPPPPPP 535


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
 Frame = +3

Query: 774 PXPXXXXPPSRCPXXXPPSXXCXPLPXXXP--PGXXXAPXPXRPXLPPP 914
           P P    PP       PP+    P P   P  PG           LPPP
Sbjct: 64  PNPFTAGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPP 112


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 803 GGXXXXGGXGGGXXGGAXXA 744
           GG    GG GGG  GG   A
Sbjct: 293 GGVGGGGGGGGGGGGGGGSA 312


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 803 GGXXXXGGXGGGXXGGAXXA 744
           GG    GG GGG  GG   A
Sbjct: 245 GGVGGGGGGGGGGGGGGGSA 264


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = -2

Query: 803  GGXXXXGGXGGGXXGGAXXAXXXXXW 726
            GG    G  GGG  GG   A     W
Sbjct: 1487 GGSPTKGAGGGGGGGGGKGAAGRSNW 1512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,666
Number of Sequences: 2352
Number of extensions: 7612
Number of successful extensions: 68
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 126711570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)