Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M05
         (1108 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000514BBB Cluster: PREDICTED: similar to CG5969-PA;...    47   8e-04
UniRef50_Q9VPE4 Cluster: CG5969-PA; n=3; Sophophora|Rep: CG5969-...    45   0.003
UniRef50_Q16J39 Cluster: Putative uncharacterized protein; n=2; ...    40   0.087

>UniRef50_UPI0000514BBB Cluster: PREDICTED: similar to CG5969-PA;
           n=2; Apocrita|Rep: PREDICTED: similar to CG5969-PA -
           Apis mellifera
          Length = 86

 Score = 47.2 bits (107), Expect = 8e-04
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = +3

Query: 192 QVFRTVIKYCMVIIIVPVLSFFVAKSILFDXVLRLDPIXXXXXXXXXXXXXXXXXXXXYI 371
           QVF+TV+ +C+VII +PVLSFF +K  +FD +L L+ +                    +I
Sbjct: 11  QVFKTVLFHCVVIIALPVLSFFTSKIFIFDGLLGLNHVPSNVYSAAVAILVLHVALGSFI 70

Query: 372 FXAYSETE 395
           + AY + +
Sbjct: 71  YRAYFDDQ 78


>UniRef50_Q9VPE4 Cluster: CG5969-PA; n=3; Sophophora|Rep: CG5969-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 105

 Score = 45.2 bits (102), Expect = 0.003
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 183 QTFQVFRTVIKYCMVIIIVPVLSFFVAKSILFDXVLRLDPIXXXXXXXXXXXXXXXXXXX 362
           Q +  F+TV+ YCM+I+ +PVL+FFV K  + D  L +  +                   
Sbjct: 27  QDYSSFKTVLFYCMLIVFLPVLTFFVLKGFVLDQFLDISEVKVNIASAVGAVVALHIALG 86

Query: 363 XYIFXAY 383
            YI+ AY
Sbjct: 87  LYIYRAY 93


>UniRef50_Q16J39 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 106

 Score = 40.3 bits (90), Expect = 0.087
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +3

Query: 189 FQVFRTVIKYCMVIIIVPVLSFFVAKSILFDXVLRLDPIXXXXXXXXXXXXXXXXXXXXY 368
           ++ FR V  YC++II++PV +FF  K++L D   +L  +                    Y
Sbjct: 20  YRNFRVVFSYCILIILLPVGTFFGCKNLLCDKFFQLTEVSSNIYSAVAAVIALHVALGLY 79

Query: 369 IFXAYSETEXXP 404
           I+ AY  ++  P
Sbjct: 80  IYRAYFYSDSSP 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,871,933
Number of Sequences: 1657284
Number of extensions: 9270963
Number of successful extensions: 26483
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25346
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 108154015438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)