Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M05
         (1108 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094764-1|AAM11117.1|  105|Drosophila melanogaster GM09417p pro...    45   2e-04
AY071456-1|AAL49078.1|  105|Drosophila melanogaster RE53796p pro...    45   2e-04
AE014296-3375|AAF51611.2|  105|Drosophila melanogaster CG5969-PA...    45   2e-04

>AY094764-1|AAM11117.1|  105|Drosophila melanogaster GM09417p
           protein.
          Length = 105

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 183 QTFQVFRTVIKYCMVIIIVPVLSFFVAKSILFDXVLRLDPIXXXXXXXXXXXXXXXXXXX 362
           Q +  F+TV+ YCM+I+ +PVL+FFV K  + D  L +  +                   
Sbjct: 27  QDYSSFKTVLFYCMLIVFLPVLTFFVLKGFVLDQFLDISEVKVNIASAVGAVVALHIALG 86

Query: 363 XYIFXAY 383
            YI+ AY
Sbjct: 87  LYIYRAY 93


>AY071456-1|AAL49078.1|  105|Drosophila melanogaster RE53796p
           protein.
          Length = 105

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 183 QTFQVFRTVIKYCMVIIIVPVLSFFVAKSILFDXVLRLDPIXXXXXXXXXXXXXXXXXXX 362
           Q +  F+TV+ YCM+I+ +PVL+FFV K  + D  L +  +                   
Sbjct: 27  QDYSSFKTVLFYCMLIVFLPVLTFFVLKGFVLDQFLDISEVKVNIASAVGAVVALHIALG 86

Query: 363 XYIFXAY 383
            YI+ AY
Sbjct: 87  LYIYRAY 93


>AE014296-3375|AAF51611.2|  105|Drosophila melanogaster CG5969-PA
           protein.
          Length = 105

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +3

Query: 183 QTFQVFRTVIKYCMVIIIVPVLSFFVAKSILFDXVLRLDPIXXXXXXXXXXXXXXXXXXX 362
           Q +  F+TV+ YCM+I+ +PVL+FFV K  + D  L +  +                   
Sbjct: 27  QDYSSFKTVLFYCMLIVFLPVLTFFVLKGFVLDQFLDISEVKVNIASAVGAVVALHIALG 86

Query: 363 XYIFXAY 383
            YI+ AY
Sbjct: 87  LYIYRAY 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,413,696
Number of Sequences: 53049
Number of extensions: 476158
Number of successful extensions: 1447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5760175428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)