Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M02
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1065 + 9427870-9427974,9428069-9428121,9428994-9429173,942...    33   0.41 
07_03_0103 - 13425411-13425713,13425874-13425974,13426410-134264...    29   3.8  
12_01_0396 - 3128047-3128273,3128350-3128632,3128717-3128874,312...    29   5.0  
03_02_0812 - 11439258-11439409,11439537-11439612,11439860-114400...    29   6.6  
04_04_1228 + 31888350-31892228,31892568-31893298,31893511-318935...    28   8.8  
03_02_0644 + 10118790-10119559,10120252-10120432,10120526-101207...    28   8.8  
02_04_0455 - 23082570-23082623,23082706-23083005,23083366-230838...    28   8.8  

>07_01_1065 +
           9427870-9427974,9428069-9428121,9428994-9429173,
           9429252-9429492
          Length = 192

 Score = 32.7 bits (71), Expect = 0.41
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +3

Query: 537 NTTXVDKYLTSSGLTVLPEHRGQNIGARLFAAREPL 644
           N   VD+YL  SG+ VLP  R + +G  L  A E L
Sbjct: 93  NLQGVDEYLYVSGIAVLPSFRRRKVGTALLKACEAL 128


>07_03_0103 -
           13425411-13425713,13425874-13425974,13426410-13426471,
           13426951-13427123
          Length = 212

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 587 ARAPRSEHRSQTLRGQRAPGKRSWHXGDCYRLHGHH 694
           AR PR+    QTL G  A  + +   G CYR  G H
Sbjct: 7   ARLPRATPHLQTLGGGAARRQSAAGAGPCYRAEGGH 42


>12_01_0396 -
           3128047-3128273,3128350-3128632,3128717-3128874,
           3129097-3129314,3129682-3129912,3130630-3130691
          Length = 392

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
 Frame = +2

Query: 158 FKGKERDGKPAKMYQIRDMDDAK--EKCL----------ELMKSTFLRDEPLCDV----- 286
           FK  +   KPA  Y+I+D +     E CL          EL+KS+FL+D+ L  V     
Sbjct: 218 FKKIDEGKKPAAFYKIKDAEVRSFIENCLAPVENRMSATELLKSSFLQDDDLISVSLVKN 277

Query: 287 -LEINRDPVSIETIMKNWEEYVAQNVSLACYTEV 385
             E  + PVS   +++  E  +  NV +A + ++
Sbjct: 278 MSEDGQQPVS--CMLRKGEFLLTGNVDVASHVDL 309


>03_02_0812 -
           11439258-11439409,11439537-11439612,11439860-11440076,
           11440150-11440350,11440673-11440872,11440955-11441075,
           11441596-11441636,11441714-11441822,11442037-11442281,
           11442382-11442496,11442970-11443064,11444279-11444535,
           11444780-11444999,11445473-11445556
          Length = 710

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 321 VSIETGSLLISNTSQSGSSLKKVLFINSKH--FSFASSMSLIW 199
           V + T ++++ +   S SS+ K+LF+N  H  F+ A     IW
Sbjct: 660 VHLVTTTVVLESLPLSNSSVGKILFVNKSHGLFAIAGGQVGIW 702


>04_04_1228 +
           31888350-31892228,31892568-31893298,31893511-31893586,
           31894089-31894164,31894571-31894656,31895414-31895482,
           31895579-31895588,31895711-31896207
          Length = 1807

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +2

Query: 380 EVDGEPDELVGFNIVLVKSIDDIDEDLDTVKGESWKKLLRTLIEAENLCNV 532
           E DG P+EL+   +   + +  +D D+   + + WKKLL  L + +   N+
Sbjct: 382 EKDGRPEELIEQRLKSKRFLLILD-DIWKCQSDDWKKLLLPLTKGQTKGNI 431


>03_02_0644 +
           10118790-10119559,10120252-10120432,10120526-10120725,
           10120834-10120992,10122375-10122741
          Length = 558

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/42 (26%), Positives = 29/42 (69%)
 Frame = +2

Query: 236 LELMKSTFLRDEPLCDVLEINRDPVSIETIMKNWEEYVAQNV 361
           ++++K +F  D+   + +E++R PV+ + ++K W ++V +N+
Sbjct: 381 MKVLKGSF--DQGATEYVEVDR-PVAYKEVLKTWAKWVDRNI 419


>02_04_0455 -
           23082570-23082623,23082706-23083005,23083366-23083859,
           23083953-23084139,23084359-23084394,23084550-23084688,
           23085589-23085596
          Length = 405

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 53  DFVVSVSHI*THKN*KYKMPFQRPASVPIGQVWSRFKGKERDGKPAK 193
           D VVSV H+  HK  K K   ++  +    ++   +K  +R  KP K
Sbjct: 156 DHVVSVEHVRWHKTGKSKAIVEKGVTKGWKKIMVLYKSSQRGAKPDK 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,589,370
Number of Sequences: 37544
Number of extensions: 356049
Number of successful extensions: 1004
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)