Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_M02
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92826-8|CAI79117.1|  325|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81475-12|CAI79149.1|  325|Caenorhabditis elegans Hypothetical p...    29   3.4  
AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical...    29   6.0  
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical...    29   6.0  
Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z92826-8|CAI79117.1|  325|Caenorhabditis elegans Hypothetical
           protein C18D11.7 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 24/80 (30%), Positives = 36/80 (45%)
 Frame = +2

Query: 98  KYKMPFQRPASVPIGQVWSRFKGKERDGKPAKMYQIRDMDDAKEKCLELMKSTFLRDEPL 277
           K+++  Q   S  I QV   F+ K R  KP +  +IRD +      L+  KS F      
Sbjct: 232 KFQLILQEDPSFSI-QVLESFRVKRRMEKPVRRVKIRDPEIQSVHLLDDKKSWF---GEA 287

Query: 278 CDVLEINRDPVSIETIMKNW 337
           C+    N+  + I TI+  W
Sbjct: 288 CEYFAFNKSKL-IFTILSIW 306


>Z81475-12|CAI79149.1|  325|Caenorhabditis elegans Hypothetical
           protein C18D11.7 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 24/80 (30%), Positives = 36/80 (45%)
 Frame = +2

Query: 98  KYKMPFQRPASVPIGQVWSRFKGKERDGKPAKMYQIRDMDDAKEKCLELMKSTFLRDEPL 277
           K+++  Q   S  I QV   F+ K R  KP +  +IRD +      L+  KS F      
Sbjct: 232 KFQLILQEDPSFSI-QVLESFRVKRRMEKPVRRVKIRDPEIQSVHLLDDKKSWF---GEA 287

Query: 278 CDVLEINRDPVSIETIMKNW 337
           C+    N+  + I TI+  W
Sbjct: 288 CEYFAFNKSKL-IFTILSIW 306


>AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical
           protein W02D3.10b protein.
          Length = 946

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
 Frame = +2

Query: 158 FKGKERDGKPAKMYQIRDMDDAKEKCLELMKSTFLRDEPLCDVLEINRDPVSIETIMKNW 337
           F  + +D     + ++RD+D   E   EL+  +   D  L + L+   D  + E I    
Sbjct: 185 FNQRWKDFVAVFIKKVRDIDQI-ELDDELLPGSDAADNILFEWLKTTEDVDAFELI---- 239

Query: 338 EEYVAQNVSLACYTEVDGEPDELVGFNIVLVKSIDDIDEDLDTVKGESWKKL-LRTLIEA 514
            E  A + S      +D   DE++   I +  S DD+D +       +WK L L T  E 
Sbjct: 240 SEISASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDMDSERKRRSIMTWKSLILTTKTEK 299

Query: 515 ENL 523
           E L
Sbjct: 300 ERL 302


>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
           protein W02D3.10a protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
 Frame = +2

Query: 158 FKGKERDGKPAKMYQIRDMDDAKEKCLELMKSTFLRDEPLCDVLEINRDPVSIETIMKNW 337
           F  + +D     + ++RD+D   E   EL+  +   D  L + L+   D  + E I    
Sbjct: 185 FNQRWKDFVAVFIKKVRDIDQI-ELDDELLPGSDAADNILFEWLKTTEDVDAFELI---- 239

Query: 338 EEYVAQNVSLACYTEVDGEPDELVGFNIVLVKSIDDIDEDLDTVKGESWKKL-LRTLIEA 514
            E  A + S      +D   DE++   I +  S DD+D +       +WK L L T  E 
Sbjct: 240 SEISASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDMDSERKRRSIMTWKSLILTTKTEK 299

Query: 515 ENL 523
           E L
Sbjct: 300 ERL 302


>Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical
           protein M04C3.2 protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 476 ESWKKLLRTLIEAENLCNVFKYYXRGQ 556
           ESWKKLL  L+E ++L  V  Y+ R +
Sbjct: 294 ESWKKLLEKLLEKDDL--VIHYFYRNE 318


>Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical
           protein C25F9.4 protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 476 ESWKKLLRTLIEAENLCNVFKYYXRGQ 556
           ESWKKLL  L+E ++L  V  Y+ R +
Sbjct: 293 ESWKKLLEKLLEKDDL--VIHYFYRNE 317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,833,918
Number of Sequences: 27780
Number of extensions: 306445
Number of successful extensions: 878
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)