Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_L24
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14314-1|CAA74694.1|  757|Homo sapiens IgE autoantigen protein.        31   5.6  
X69301-1|CAA49159.1|  976|Homo sapiens mast/stem cell growth  fa...    31   7.3  
X06182-1|CAA29548.1|  976|Homo sapiens protein ( Human c-kit pro...    31   7.3  
U63834-2|AAC50969.1|  972|Homo sapiens KIT protein protein.            31   7.3  
U63834-1|AAC50968.1|  976|Homo sapiens KIT protein protein.            31   7.3  
BC071593-1|AAH71593.1|  976|Homo sapiens KIT protein protein.          31   7.3  

>Y14314-1|CAA74694.1|  757|Homo sapiens IgE autoantigen protein.
          Length = 757

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 486 QPMEEAFASNKRTADELFGDIEDIDFDDKEMPNKRFKSEEENDLELINKIIEGRRLRQL 662
           +P+ +   S+    + +  DI D +      P      E+E +LEL  ++ +GRRLRQL
Sbjct: 413 EPVPQPLPSDDTRVENM--DISDEEEGGAPPPGSPVLEEDEAELELQKQLEKGRRLRQL 469


>X69301-1|CAA49159.1|  976|Homo sapiens mast/stem cell growth
           factor receptor protein.
          Length = 976

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 192 NSNKTDKMSDYPDPDEEYELMYADELEL--MQEQDALTDTNVVPKSKITKRSLDFSNHMS 365
           N   TDK  DYP  + E  + Y  EL L  ++  +  T T +V  S +   ++ F+ +++
Sbjct: 352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV-NAAIAFNVYVN 410

Query: 366 SQP 374
           ++P
Sbjct: 411 TKP 413


>X06182-1|CAA29548.1|  976|Homo sapiens protein ( Human c-kit
           proto-oncogene mRNA. ).
          Length = 976

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 192 NSNKTDKMSDYPDPDEEYELMYADELEL--MQEQDALTDTNVVPKSKITKRSLDFSNHMS 365
           N   TDK  DYP  + E  + Y  EL L  ++  +  T T +V  S +   ++ F+ +++
Sbjct: 352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV-NAAIAFNVYVN 410

Query: 366 SQP 374
           ++P
Sbjct: 411 TKP 413


>U63834-2|AAC50969.1|  972|Homo sapiens KIT protein protein.
          Length = 972

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 192 NSNKTDKMSDYPDPDEEYELMYADELEL--MQEQDALTDTNVVPKSKITKRSLDFSNHMS 365
           N   TDK  DYP  + E  + Y  EL L  ++  +  T T +V  S +   ++ F+ +++
Sbjct: 352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV-NAAIAFNVYVN 410

Query: 366 SQP 374
           ++P
Sbjct: 411 TKP 413


>U63834-1|AAC50968.1|  976|Homo sapiens KIT protein protein.
          Length = 976

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 192 NSNKTDKMSDYPDPDEEYELMYADELEL--MQEQDALTDTNVVPKSKITKRSLDFSNHMS 365
           N   TDK  DYP  + E  + Y  EL L  ++  +  T T +V  S +   ++ F+ +++
Sbjct: 352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV-NAAIAFNVYVN 410

Query: 366 SQP 374
           ++P
Sbjct: 411 TKP 413


>BC071593-1|AAH71593.1|  976|Homo sapiens KIT protein protein.
          Length = 976

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 192 NSNKTDKMSDYPDPDEEYELMYADELEL--MQEQDALTDTNVVPKSKITKRSLDFSNHMS 365
           N   TDK  DYP  + E  + Y  EL L  ++  +  T T +V  S +   ++ F+ +++
Sbjct: 352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV-NAAIAFNVYVN 410

Query: 366 SQP 374
           ++P
Sbjct: 411 TKP 413


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,544,847
Number of Sequences: 237096
Number of extensions: 1804073
Number of successful extensions: 4442
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4440
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)