Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_L19
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 203 1e-52
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 200 1e-51
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 199 2e-51
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 149 3e-36
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 146 2e-35
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 140 1e-33
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 140 1e-33
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 140 1e-33
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 94 1e-19
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 94 1e-19
AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical... 29 5.9
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 203 bits (496), Expect = 1e-52
Identities = 90/182 (49%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Frame = +1
Query: 148 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 327
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 328 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-E 504
L G DY +FK+GI+PMWED N GGRWL+ ++K++R LD +WL++++ ++GE F E
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDE 139
Query: 505 NSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKXLKEQLR--DTRQDXXQVHRDTM 678
D ICGAVVNVR K DK+++WT DA + + IG+ LK++L DT +VH+D+
Sbjct: 140 YGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSS 199
Query: 679 VK 684
+
Sbjct: 200 AR 201
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 200 bits (487), Expect = 1e-51
Identities = 92/184 (50%), Positives = 128/184 (69%), Gaps = 5/184 (2%)
Frame = +1
Query: 148 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 327
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 328 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK-QRFTD-LDRFWLDVVLLLIGENF 501
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE F
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQF 139
Query: 502 -ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKXLKEQLR--DTRQDXXQVHRD 672
E D ICGAVVNVR K DK+++WT DA + + IG+ LK++L DT +VH+D
Sbjct: 140 DEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKD 199
Query: 673 TMVK 684
+ +
Sbjct: 200 SSAR 203
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 199 bits (485), Expect = 2e-51
Identities = 92/185 (49%), Positives = 128/185 (69%), Gaps = 6/185 (3%)
Frame = +1
Query: 148 SNAEVPPEFLIKHPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSE 327
S+A VPPE L +HPLQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGG 79
Query: 328 LRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK--QRFTD-LDRFWLDVVLLLIGEN 498
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE
Sbjct: 80 LNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQ 139
Query: 499 F-ENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKXLKEQLR--DTRQDXXQVHR 669
F E D ICGAVVNVR K DK+++WT DA + + IG+ LK++L DT +VH+
Sbjct: 140 FDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHK 199
Query: 670 DTMVK 684
D+ +
Sbjct: 200 DSSAR 204
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 149 bits (360), Expect = 3e-36
Identities = 66/157 (42%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Frame = +1
Query: 184 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 363
+PL+ W+ W+ +++RNK+WE+ L ++ TF+TV +FW LY I+ PS L DY VF+
Sbjct: 12 YPLKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRD 71
Query: 364 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 540
I+PMWE N GGRWLI ++K + +D WL++++ L+GE F ++ + ICG V NV
Sbjct: 72 DIQPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNV 131
Query: 541 RPKVDKIAIWTADAMKQHATIEIGKXLKEQLRDTRQD 651
R K KI++WT D + IG LKE+L +D
Sbjct: 132 RGKGSKISVWTKDCNDDETNMRIGVVLKEKLMAASKD 168
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 146 bits (353), Expect = 2e-35
Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 4/158 (2%)
Frame = +1
Query: 178 IKHP---LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDY 348
I HP L+ W+ W+ +++RNK+WEE L + TF +V +FW L+ IK PS L DY
Sbjct: 12 ISHPVYKLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDY 71
Query: 349 AVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICG 525
VF+ GI PMWE N+ GGRWLI++EK + +D W ++++ +IGE F ++ + +CG
Sbjct: 72 NVFRDGIEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCG 131
Query: 526 AVVNVRPKVDKIAIWTADAMKQHATIEIGKXLKEQLRD 639
V NVR K KI++WT ++ A + IG LK+ L +
Sbjct: 132 IVCNVRGKGSKISVWTTNSADDGANLRIGGVLKQVLNN 169
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 140 bits (339), Expect = 1e-33
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +1
Query: 184 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 363
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 364 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 540
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 541 RPKVDKIAIWTADAMKQHATIEIGKXLKEQL 633
R + KI++WT + + IG LKE+L
Sbjct: 129 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKL 159
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 140 bits (339), Expect = 1e-33
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +1
Query: 184 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 363
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 48 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 107
Query: 364 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 540
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 108 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 167
Query: 541 RPKVDKIAIWTADAMKQHATIEIGKXLKEQL 633
R + KI++WT + + IG LKE+L
Sbjct: 168 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKL 198
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 140 bits (339), Expect = 1e-33
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +1
Query: 184 HPLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQ 363
+PLQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRD 68
Query: 364 GIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNV 540
I+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NV
Sbjct: 69 DIQPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNV 128
Query: 541 RPKVDKIAIWTADAMKQHATIEIGKXLKEQL 633
R + KI++WT + + IG LKE+L
Sbjct: 129 RGQGSKISVWTKNCNDDDTNMRIGVVLKEKL 159
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 94.3 bits (224), Expect = 1e-19
Identities = 45/120 (37%), Positives = 70/120 (58%)
Frame = +1
Query: 277 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 456
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 457 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKXLKEQLR 636
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ L+
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 94.3 bits (224), Expect = 1e-19
Identities = 45/120 (37%), Positives = 70/120 (58%)
Frame = +1
Query: 277 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 456
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 457 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKXLKEQLR 636
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ L+
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
>AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical
protein C17H12.8 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 542 LTLTTAPQISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSHIG 372
LT T S++F F TT Q ++KSV R++ H +L + +H+G
Sbjct: 84 LTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHSSFRIVVHFERMLNTTVTHLG 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,389,179
Number of Sequences: 27780
Number of extensions: 299441
Number of successful extensions: 779
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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