Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_L17
         (840 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL096764-4|CAM28219.1|  691|Homo sapiens chromosome X open readi...    55   4e-07
AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi...    55   4e-07
AL049563-2|CAI43016.2|  691|Homo sapiens chromosome X open readi...    55   4e-07
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi...    55   4e-07
DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain conta...    51   6e-06
BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4...    51   6e-06
BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4...    51   6e-06

>AL096764-4|CAM28219.1|  691|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 691

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +2

Query: 47  RDFVIFEANKGPQIKIT-NGYNKTIYLYYSTEMKHFDVIYTKDFINNSSFCQSLVYEILY 223
           RDF+++     P   +T NGY   I L YS+   H+D +Y+K F ++++ CQ+++YEILY
Sbjct: 3   RDFILYRFPGKPPTYVTDNGYEDKILLCYSSS-GHYDSVYSKQFQSSAAVCQAVLYEILY 61

Query: 224 SGVYQLQD 247
             V+ + +
Sbjct: 62  KDVFVVDE 69


>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +2

Query: 47  RDFVIFEANKGPQIKIT-NGYNKTIYLYYSTEMKHFDVIYTKDFINNSSFCQSLVYEILY 223
           RDF+++     P   +T NGY   I L YS+   H+D +Y+K F ++++ CQ+++YEILY
Sbjct: 312 RDFILYRFPGKPPTYVTDNGYEDKILLCYSSS-GHYDSVYSKQFQSSAAVCQAVLYEILY 370

Query: 224 SGVYQLQD 247
             V+ + +
Sbjct: 371 KDVFVVDE 378


>AL049563-2|CAI43016.2|  691|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 691

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +2

Query: 47  RDFVIFEANKGPQIKIT-NGYNKTIYLYYSTEMKHFDVIYTKDFINNSSFCQSLVYEILY 223
           RDF+++     P   +T NGY   I L YS+   H+D +Y+K F ++++ CQ+++YEILY
Sbjct: 3   RDFILYRFPGKPPTYVTDNGYEDKILLCYSSS-GHYDSVYSKQFQSSAAVCQAVLYEILY 61

Query: 224 SGVYQLQD 247
             V+ + +
Sbjct: 62  KDVFVVDE 69


>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score = 54.8 bits (126), Expect = 4e-07
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +2

Query: 47  RDFVIFEANKGPQIKIT-NGYNKTIYLYYSTEMKHFDVIYTKDFINNSSFCQSLVYEILY 223
           RDF+++     P   +T NGY   I L YS+   H+D +Y+K F ++++ CQ+++YEILY
Sbjct: 312 RDFILYRFPGKPPTYVTDNGYEDKILLCYSSS-GHYDSVYSKQFQSSAAVCQAVLYEILY 370

Query: 224 SGVYQLQD 247
             V+ + +
Sbjct: 371 KDVFVVDE 378


>DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain
           containing 4 protein.
          Length = 1048

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +2

Query: 44  RRDFVIF-EANKGPQIKITNGYNKTIYLYYSTEMKHFDVIYTKDFINNSSFCQSLVYEIL 220
           R+DF+I+ E N  P     N + + + L +S    H+D++Y   +  +S+ CQSL+YE+L
Sbjct: 49  RKDFIIYREPNVSPSQVTENNFPEKVLLCFSNG-NHYDIVYPIKYKESSAMCQSLLYELL 107

Query: 221 YSGVYQ 238
           Y  V++
Sbjct: 108 YEKVFK 113


>BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4
           protein.
          Length = 1049

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +2

Query: 44  RRDFVIF-EANKGPQIKITNGYNKTIYLYYSTEMKHFDVIYTKDFINNSSFCQSLVYEIL 220
           R+DF+I+ E N  P     N + + + L +S    H+D++Y   +  +S+ CQSL+YE+L
Sbjct: 49  RKDFIIYREPNVSPSQVTENNFPEKVLLCFSNG-NHYDIVYPIKYKESSAMCQSLLYELL 107

Query: 221 YSGVYQ 238
           Y  V++
Sbjct: 108 YEKVFK 113


>BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4
           protein.
          Length = 1049

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +2

Query: 44  RRDFVIF-EANKGPQIKITNGYNKTIYLYYSTEMKHFDVIYTKDFINNSSFCQSLVYEIL 220
           R+DF+I+ E N  P     N + + + L +S    H+D++Y   +  +S+ CQSL+YE+L
Sbjct: 49  RKDFIIYREPNVSPSQVTENNFPEKVLLCFSNG-NHYDIVYPIKYKESSAMCQSLLYELL 107

Query: 221 YSGVYQ 238
           Y  V++
Sbjct: 108 YEKVFK 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,539,795
Number of Sequences: 237096
Number of extensions: 831946
Number of successful extensions: 1023
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)