Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_L12
         (988 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            26   1.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   8.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   8.1  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 654 GRXTXPPXXKXXPPPPPPP 598
           G  + PP  +  PPPP PP
Sbjct: 743 GPSSSPPVMESIPPPPKPP 761


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 20/82 (24%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
 Frame = -2

Query: 705 PGPLAXKNXXXXPPPXSGRXT--XPPXXKXXPPPPPPPXXXXXXXXPXXXXXGXXXXXXX 532
           PGP   +      PP +G  T   PP      P PP          P     G       
Sbjct: 187 PGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQP 246

Query: 531 XXXPARGXVFXXXXXQXPPPXP 466
               A+G        Q PP  P
Sbjct: 247 RPPSAQGMQRPPMMGQPPPIRP 268



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 11/36 (30%), Positives = 13/36 (36%)
 Frame = -2

Query: 705 PGPLAXKNXXXXPPPXSGRXTXPPXXKXXPPPPPPP 598
           PG +        P P S +    P     PPP  PP
Sbjct: 234 PGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPP 269


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 618 PPPPPPP 598
           PPPPPPP
Sbjct: 530 PPPPPPP 536


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 618 PPPPPPP 598
           PPPPPPP
Sbjct: 783 PPPPPPP 789



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 618 PPPPPPP 598
           PPPPPPP
Sbjct: 784 PPPPPPP 790



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 618 PPPPPPP 598
           PPPPPPP
Sbjct: 785 PPPPPPP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,564
Number of Sequences: 2352
Number of extensions: 4175
Number of successful extensions: 131
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108119037
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)