Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_L09
(933 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.32
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.3
01_03_0005 + 11568545-11569119,11569179-11569191 30 2.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 3.0
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 30 3.0
07_03_1636 + 28290642-28291574 29 4.0
01_07_0009 - 40397276-40397534,40397637-40398745,40398834-403989... 29 4.0
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137... 29 5.3
12_02_1219 + 27096477-27096590,27096704-27097078 29 7.0
12_02_0299 - 17051570-17052474,17053542-17053755 29 7.0
10_01_0026 - 351737-353443 29 7.0
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 7.0
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.0
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460 28 9.2
06_01_0178 + 1386981-1387505 28 9.2
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.1 bits (72), Expect = 0.32
Identities = 20/76 (26%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Frame = +1
Query: 712 FXXXXPPXXGGGXXXXPPXXXXXXGXXXKKKXXPPPPPXXFFXXXXXXXPFFF--XXPPP 885
F PP G P G +++ PPPPP ++ P+ PPP
Sbjct: 51 FLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQ--PPPPPQMYYQPPPPPPPYGVNSSQPPP 108
Query: 886 PXXXXXXXXXVXPPPP 933
P PPPP
Sbjct: 109 PPPPPPSPPPSAPPPP 124
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = -1
Query: 930 GGGXXXPXXXXXXXGGGGGXKKKRXXXXXXXKKXXGGGGGGXFFFXXPPXXXXXXGGXXX 751
GGG P GGGG + GGGGG P GG
Sbjct: 138 GGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGR 197
Query: 750 XPPPXXGGG 724
P GGG
Sbjct: 198 APGGGGGGG 206
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 927 GGXXXPXXXXXXXGGGGGXKKKRXXXXXXXKKXXGGGGGGXFFFXXPPXXXXXXGGXXXX 748
GG P GGGGG K GGGGGG P GG
Sbjct: 342 GGVFPPTPDLGGGGGGGGGGTKVRVCAPKDISGGGGGGGG---MLDKPDEAGGGGGGGSG 398
Query: 747 PPPXXGGG 724
GGG
Sbjct: 399 GGGGGGGG 406
Score = 28.7 bits (61), Expect = 7.0
Identities = 24/95 (25%), Positives = 28/95 (29%), Gaps = 3/95 (3%)
Frame = -2
Query: 932 GGGGXTXXXXXXXXXGGGGXXKKK---GXXXXXXKKKXXGGGGGXFFFXXXXPXXXXXXG 762
GGGG GGGG + G ++ GGGGG P G
Sbjct: 110 GGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGG--GALARPPGGGRGG 167
Query: 761 GXXXXPPPXXGGXXXXKKXXRGXXXXXPXXPPXGG 657
P GG + G P P GG
Sbjct: 168 ALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGG 202
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/77 (29%), Positives = 23/77 (29%)
Frame = +1
Query: 658 PPXGGXXGXXXXXPLXXFFXXXXPPXXGGGXXXXPPXXXXXXGXXXKKKXXPPPPPXXFF 837
PP GG G P F PP GG PP G PP PP
Sbjct: 1152 PPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGV-----GGPPTPPGAPA 1206
Query: 838 XXXXXXXPFFFXXPPPP 888
P PPPP
Sbjct: 1207 PPMPPGVP---GGPPPP 1220
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 7/41 (17%)
Frame = -1
Query: 825 GGGGGGXFFFXXPP-------XXXXXXGGXXXXPPPXXGGG 724
GGGGGG + PP GG PPP GGG
Sbjct: 81 GGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGG 121
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +1
Query: 760 PPXXXXXXGXXXKKKXXPPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXXXXXVXPPPP 933
PP + PPPPP P PPPP V PPPP
Sbjct: 570 PPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPP-----PPPPPPPILPNRSVPPPPP 622
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = +1
Query: 727 PPXXGGGXXXXPPXXXXXXGXXXKKKXXPPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXX 906
PP PP + PPPPP P PPPP
Sbjct: 591 PPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPP-----PPPPPPPPSL 645
Query: 907 XXXVXPPPP 933
+ PPPP
Sbjct: 646 PNRLVPPPP 654
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +1
Query: 727 PPXXGGGXXXXPPXXXXXXGXXXKKKXXPPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXX 906
P G P K+ P PPP P PPPP
Sbjct: 720 PANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAP-----PPPPPQAPKP 774
Query: 907 XXXVXPPPP 933
V PPPP
Sbjct: 775 PGTVPPPPP 783
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1
Query: 888 GGGGGXKKKRXXXXXXXKKXXGGGGGG 808
GGGGG KKK KK GGGGGG
Sbjct: 213 GGGGGGKKK-------GKKGGGGGGGG 232
>07_03_1636 + 28290642-28291574
Length = 310
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 811 PPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXXXXXVXPPP 930
PPPPP F P+ PPPP PPP
Sbjct: 151 PPPPPPQLFETAPPSPPY---VPPPPDAYLRKPSPPSPPP 187
>01_07_0009 -
40397276-40397534,40397637-40398745,40398834-40398932,
40399043-40399272,40399534-40399585,40399679-40399865,
40399987-40400193,40400283-40400449,40400804-40401094,
40401166-40401636
Length = 1023
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 888 GGGGGXKKKRXXXXXXXKKXXGGGGGGXF 802
GGGGG + KR + GGGGG F
Sbjct: 8 GGGGGARWKRARVAGMGEGKAGGGGGAAF 36
>10_08_0161 +
15312986-15313160,15313250-15313557,15313676-15313754,
15313856-15314373
Length = 359
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 887 GGGGXXKKKGXXXXXXKKKXXGGGGG 810
G GG KK G KK GGGGG
Sbjct: 234 GAGGGDKKDGGGGDKKDKKEGGGGGG 259
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -1
Query: 933 RGGGXXXPXXXXXXXGGGGGXKKKRXXXXXXXKKXXGGGGGG 808
RGGG GGGGG ++R GG GGG
Sbjct: 100 RGGGGGYGGGGGYGGGGGGGYGQRREGGYGGGGGYGGGRGGG 141
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 811 PPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXXXXXVXPPPP 933
PPPPP F P PP P PPPP
Sbjct: 289 PPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPP 329
>10_01_0026 - 351737-353443
Length = 568
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 796 KKKXXPPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXXXXXVXPPPP 933
KKK PPPP FF + PP PPPP
Sbjct: 130 KKKKRPPPPNMPFFTDEKGNVYYATGGLPPMWQQHGSSNYSIPPPP 175
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +1
Query: 811 PPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXXXXXVXPPPP 933
PPPPP + P + PPPP PPPP
Sbjct: 424 PPPPPGSYAPVPWGQPPPYASYPPPP----PGSSMYNPPPP 460
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +1
Query: 727 PPXXGGGXXXXPPXXXXXXGXXXKKKXXPPPPPXXFFXXXXXXXPFFFXXPPPPXXXXXX 906
PP PP K PPPPP P PPPP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPA---KGPPPPPPPKGPSPPPPPPPGGK 373
Query: 907 XXXVXPPPP 933
PPPP
Sbjct: 374 KGGPPPPPP 382
>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
Length = 515
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 932 GGGGXTXXXXXXXXXGGGGXXKKKGXXXXXXKKKXXGGGGG 810
GGGG GGGG G KK G GGG
Sbjct: 302 GGGGKNGGGQPNNAKGGGGAPNGGGNHPAQGKKGGGGQGGG 342
>06_01_0178 + 1386981-1387505
Length = 174
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 888 GGGGGXKKKRXXXXXXXKKXXGGGGGG 808
GGGGG K ++ GGGGGG
Sbjct: 73 GGGGGGKGRKGGAGGHGGAGGGGGGGG 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,224,885
Number of Sequences: 37544
Number of extensions: 525807
Number of successful extensions: 2498
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1971
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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