Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_L09
         (933 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.27 

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 930 GGGXXXPXXXXXXXGGGGGXKKKRXXXXXXXKKXXGGGGGG 808
           GGG           GGGGG + +        ++  G GGGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 13/41 (31%), Positives = 15/41 (36%)
 Frame = -1

Query: 930 GGGXXXPXXXXXXXGGGGGXKKKRXXXXXXXKKXXGGGGGG 808
           GGG           GGGGG  +         +    GGGGG
Sbjct: 214 GGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGG 254



 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = -1

Query: 930 GGGXXXPXXXXXXXGGGGGXKKKRXXXXXXXKKXXGGGGGG 808
           GGG           GGGG  +  R           GGGGGG
Sbjct: 215 GGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -2

Query: 932 GGGGXTXXXXXXXXXGGGGXXKKKGXXXXXXKKKXXGGGGG 810
           GGGG +         GGGG  +         +    GGGGG
Sbjct: 214 GGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGG 254



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -2

Query: 932 GGGGXTXXXXXXXXXGGGGXXKKKGXXXXXXKKKXXGGGGG 810
           GGGG +         GGGG   +        ++    GGGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGG 253



 Score = 23.8 bits (49), Expect = 7.6
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -2

Query: 293 GRGSGKXGGXNXXGXGXFLGXXSPXGG 213
           G G G  GG    G G   G   P GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGG 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,060
Number of Sequences: 2352
Number of extensions: 9119
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)