Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP02_F_L07
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0515 - 3864796-3865425 32 0.73
01_01_0070 - 542603-542686,542803-543441 32 0.73
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.3
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 30 2.2
12_02_1174 - 26696869-26698191 29 3.9
12_02_0299 - 17051570-17052474,17053542-17053755 29 3.9
07_01_0080 + 587674-588510 29 3.9
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 5.2
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 29 5.2
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 29 6.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 6.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 6.8
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 6.8
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 9.0
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 28 9.0
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.9 bits (69), Expect = 0.73
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 786 PFXXXPPPXXXXPXSXPPXXXPPXXPPXXXXPFXXXPXSXXPS 914
P PPP S PP PP PP P P PS
Sbjct: 68 PLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPS 110
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 802 PPPXXPXXSXXPPPXXPPXXXPXXS 876
PPP P S PPP PP P S
Sbjct: 90 PPPPPPAASPPPPPPSPPPPSPVKS 114
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 31.9 bits (69), Expect = 0.73
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 786 PFXXXPPPXXXXPXSXPPXXXPPXXPPXXXXPFXXXPXSXXP 911
P PPP P + PP PP PP P P + P
Sbjct: 87 PKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPP 128
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 714 PPGXXXXXXXPXXPXXXXXXXXXXPFXXXPPPXXXXPXSXPPXXXPPXXPP 866
PP P P P PPP P + PP PP PP
Sbjct: 82 PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 801 PPPXXXXPXSXPPXXXPPXXPPXXXXP 881
PPP P S PP PP PP P
Sbjct: 106 PPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 801 PPPXXXXPXSXPPXXXPPXXPPXXXXPFXXXP 896
PPP P PP PP PP P P
Sbjct: 425 PPPPPLPPPPPPPPPPPPPLPPNMPPPLPPPP 456
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 786 PFXXXPPPXXXXPXSXPPXXXPPXXPP 866
P PPP P PP PP PP
Sbjct: 429 PLPPPPPPPPPPPPPLPPNMPPPLPPP 455
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/89 (23%), Positives = 21/89 (23%), Gaps = 1/89 (1%)
Frame = +3
Query: 648 PPXXXPXXXXXXPQXXXXXXXXPPGXXXXXXXPXXPXXXXXXXXXXPFXXXPPPXXXXPX 827
PP P P PP P P PPP P
Sbjct: 141 PPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPS 200
Query: 828 SXPPXXXP-PXXPPXXXXPFXXXPXSXXP 911
PP P P PP P P P
Sbjct: 201 VKPPVVQPKPQPPPTLPPPSPPPPPPTVP 229
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +3
Query: 744 PXXPXXXXXXXXXXPFXXXPPPXXXXPXSXPPXXXPPXXPPXXXXPFXXXP 896
P P P PP P S PP PP PP P P
Sbjct: 123 PPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPP 173
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 744 PXXPXXXXXXXXXXPFXXXPPPXXXXPXSXPPXXXPPXXPPXXXXPF 884
P P P PP P PP PP PP PF
Sbjct: 292 PPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPF 338
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +3
Query: 744 PXXPXXXXXXXXXXPFXXXPPPXXXXPXSXP---PXXXPPXXPPXXXXPFXXXP 896
P P P+ PPP P P P PP PP PF P
Sbjct: 252 PPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLP 305
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 802 PPPXXPXXSXXPPPXXPPXXXP 867
PPP P S PPP PP P
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPP 114
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 789 FXXXPPPXXXXPXSXPPXXXPPXXPPXXXXP 881
F PPP P S P PP PP P
Sbjct: 88 FRRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 801 PPPXXXXPXSXPPXXXPPXXPPXXXXPFXXXP 896
PPP P PP PP PP P P
Sbjct: 64 PPPASPPPAPTPPQTRPPSPPPQQQQPRPVSP 95
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 802 PPPXXPXXSXXPPPXXPPXXXPXXSXL 882
PPP P + PPP PP P + L
Sbjct: 143 PPPPPPPMAVAPPPFLPPPLRPFAAPL 169
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 790 SXXXPPPXXPXXSXXPPPXXPPXXXPXXSXLSXXXP 897
S PPP P S PPP PP P + +S P
Sbjct: 144 SSSSPPPPPPQESTPPPP-PPPPPAPVAAAVSAPAP 178
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 802 PPPXXPXXSXXPPPXXPPXXXPXXSXLSXXXP 897
PPP P S PPP PP P S L P
Sbjct: 608 PPPILPNRSVPPPPP-PPPPLPNHSVLPPPPP 638
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 744 PXXPXXXXXXXXXXPFXXXPPPXXXXPXSXPPXXXPPXXPP 866
P P P PPP P PP PP PP
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 801 PPPXXXXPXSXPPXXXPPXXPPXXXXP 881
PPP P PP PP PP P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPP 379
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +1
Query: 802 PPPXXPXXSXXPPPXXPPXXXPXXSXLSXXXP 897
PPP P PPP PP P + P
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAP 385
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 769 PXXXXXXSXXXPPPXXPXXSXXPPPXXPPXXXP 867
P S PPP P PPP PP P
Sbjct: 63 PHPHHHVSAAPPPPQTPPSPPPPPPPPPPPPPP 95
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 802 PPPXXPXXSXXPPPXXPPXXXP 867
PPP P + PPP PP P
Sbjct: 141 PPPHVPKAAPPPPPPPPPHAPP 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,804,309
Number of Sequences: 37544
Number of extensions: 160802
Number of successful extensions: 2344
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1782
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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