Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_L03
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.5  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 498 SGMVDYRSLWVPI*PRILRMDDWSVHTLLVYQLAMYEFLS*VRSLY 361
           S + DYRSLW+ +   I  + + S +T  V  L +Y FL    ++Y
Sbjct: 261 SQVADYRSLWMLLSKLIRDVGNASGYT--VTFLCLYLFLIITLTIY 304


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 491 IPEMDWRYCARMRIVIN*LLMCFKNK 568
           +PE D  Y  + R+ +  LL+  KNK
Sbjct: 268 VPETDEVYTGKRRLAMLDLLLTAKNK 293


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 491 IPEMDWRYCARMRIVIN*LLMCFKNK 568
           +PE D  Y  + R+ +  LL+  KNK
Sbjct: 268 VPETDEVYTGKRRLAMLDLLLTAKNK 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,641
Number of Sequences: 336
Number of extensions: 3279
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)