Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_L03
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0186 + 11595041-11595182,11596442-11596473,11596628-115967...    82   7e-16
10_06_0185 + 11592108-11592265,11592585-11592685,11593917-115939...    33   0.23 

>10_06_0186 +
           11595041-11595182,11596442-11596473,11596628-11596722,
           11596841-11596925
          Length = 117

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 36/67 (53%), Positives = 50/67 (74%)
 Frame = +3

Query: 306 NSIPGITSIYEWKNEINEDKETLLMIKTRTSQVDKLTEYVRSNHPYEVCEVISVPIKNGN 485
           NS  GI S+Y W+ ++  D E LL+IKTR S +D LTE+V++NH Y+V EVI++PIK GN
Sbjct: 44  NSGNGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGN 103

Query: 486 PPYLKWI 506
             YL+W+
Sbjct: 104 LKYLEWL 110


>10_06_0185 +
           11592108-11592265,11592585-11592685,11593917-11593979,
           11594407-11594426
          Length = 113

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 240 PNDEVGRTIGHGLVKNKLAACVNSIP 317
           PN E G+ +   ++  KLAACVN +P
Sbjct: 82  PNKEAGKRLAGSIISEKLAACVNIVP 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,235,059
Number of Sequences: 37544
Number of extensions: 307181
Number of successful extensions: 2132
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2081
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)