Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_L03
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118865-1|AAM50725.1|  198|Drosophila melanogaster GM24986p pro...   127   2e-29
AE014298-2009|AAF48350.1|  198|Drosophila melanogaster CG11590-P...   127   2e-29
AY113341-1|AAM29346.1|  295|Drosophila melanogaster GH10083p pro...    29   6.4  
AE014298-876|AAF46152.1|  295|Drosophila melanogaster CG3823-PA ...    29   6.4  

>AY118865-1|AAM50725.1|  198|Drosophila melanogaster GM24986p
           protein.
          Length = 198

 Score =  127 bits (306), Expect = 2e-29
 Identities = 54/94 (57%), Positives = 72/94 (76%)
 Frame = +3

Query: 240 PNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEDKETLLMIKTRTSQVDKLTE 419
           P+ E  R +G  +V+ KLAACVN +  + SIY+W+ EI+ED E LLMIKTRTS++D L++
Sbjct: 98  PDRESARKLGRSIVELKLAACVNIVSQVESIYKWEGEISEDSEYLLMIKTRTSRIDDLSK 157

Query: 420 YVRSNHPYEVCEVISVPIKNGNPPYLKWIGDIVP 521
           ++R NHPY V EVI++PI+NGNPPYL WI   VP
Sbjct: 158 FIRENHPYSVAEVIALPIQNGNPPYLDWIAQTVP 191


>AE014298-2009|AAF48350.1|  198|Drosophila melanogaster CG11590-PA
           protein.
          Length = 198

 Score =  127 bits (306), Expect = 2e-29
 Identities = 54/94 (57%), Positives = 72/94 (76%)
 Frame = +3

Query: 240 PNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEDKETLLMIKTRTSQVDKLTE 419
           P+ E  R +G  +V+ KLAACVN +  + SIY+W+ EI+ED E LLMIKTRTS++D L++
Sbjct: 98  PDRESARKLGRSIVELKLAACVNIVSQVESIYKWEGEISEDSEYLLMIKTRTSRIDDLSK 157

Query: 420 YVRSNHPYEVCEVISVPIKNGNPPYLKWIGDIVP 521
           ++R NHPY V EVI++PI+NGNPPYL WI   VP
Sbjct: 158 FIRENHPYSVAEVIALPIQNGNPPYLDWIAQTVP 191


>AY113341-1|AAM29346.1|  295|Drosophila melanogaster GH10083p
           protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 258 FQLHHWVLSHIPPNICHYQHFQKTYLFDYKQNKASLLIDKKLKQFSCLKKSACYLLNID 82
           F+L H+   H+P     Y+HF ++ L +    +A  + D KL+    LK+   YL++ +
Sbjct: 210 FKLIHF---HLPNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQWMQLLKEQRDYLMDTE 265


>AE014298-876|AAF46152.1|  295|Drosophila melanogaster CG3823-PA
           protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 258 FQLHHWVLSHIPPNICHYQHFQKTYLFDYKQNKASLLIDKKLKQFSCLKKSACYLLNID 82
           F+L H+   H+P     Y+HF ++ L +    +A  + D KL+    LK+   YL++ +
Sbjct: 210 FKLIHF---HLPNADTPYRHFPRSMLPEEYGGEAGKMSDLKLQWMQLLKEQRDYLMDTE 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,712,481
Number of Sequences: 53049
Number of extensions: 544412
Number of successful extensions: 2341
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)